Gene BamMC406_3204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3204 
Symbol 
ID6180949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp105189 
End bp106394 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content69% 
IMG OID641682979 
Productmajor facilitator transporter 
Protein accessionYP_001809893 
Protein GI172062242 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTTC CATCACCGAT TGCCGGCAAG CGTGCGATTC CGCGGACCGT GTGGGCGCTG 
GGCCTCGTCA GCCTGTTCAT GGACCTGTCG TCCGAGCTGA TCCATGCGCT GTTGCCGATC
TATCTGGTGT CGACGATGGG GATGAGCGTC GTCGCGCTCG GCATCCTCGA AGGAGCGGCC
GAGGCAACCG CGATGATCGT GAAGGTGTTC TCCGGCGCGA TCAGCGACTG GCTCGGGCGC
CGCAAGGGAT TGCTGCTGCT CGGCTACGGC CTCGCGGCGT TCACCAAGCC GTTGTTTCCG
CTCGCGTCCA CCCCGGCCGT GGTCGTGACG GCCCGGCTGC TCGATCGCGT CGGCAAGGGG
ATTCGCGGCG CGCCGCGGGA CGCGCTGGTG GCCGACGTCG CACCGCCCGA AATCCGCGGC
GCGTGCTTCG GCCTGCGTCA GTCGATGGAT ACCGTGGGCG CGTTTCTCGG CCCGCTGCTC
GCCATCGCGC TGATGTTGTT GTTCGCGGAC CGCATCAGGA CCGTGCTCTG GTTCGCCGTG
GTGCCGGCGT TCATCGCGAT CGCGCTGATC GTCTTCGGCG TGCGCGAGCC CGATCGGGCG
GAATCGCAAC GGCGCTTTCG CTCGCCGCTG CGCTGGAGCG CGCTGCGCGA GTTTCCGCGC
AGCTACTGGT TCGTCGTCGC GGCCGGCGCG ACCTTTACAC TCGCGCGTTT CAGCGAGGCG
TTCCTGGTGC TGCGCGCGCA GCAGACGGGG CTCGACGCCG CATGGATCCC GGCGGTGATG
GTCGCGATGA GCGTCACCTA TTCGCTGTCC GCGTGGCCGG TCGGCATCCT GTCGGACCGG
CTGGATCGCC GCGTGCTGCT CGCGGCCGGC ATGGTGCTGC TGATCGCGGC CGACCTGCTG
CTGGGCATCG GCGCGTCGAC GATCTCGATG TTCGTCGGCG TGGCCGTGTG GGGGCTGCAC
ATGGGCTTTA CGCAGGGCAT CCTCGCCGCG ATGGTGTCGG AAACCTCGCC GGCCACGCTG
CGCGGCACCG CGTTCGGCGT ATTCAATCTC GTGAGCGGCA TCTGCATGCT GCTCGCGAGC
AGCCTCGCCG GCGCGCTGTG GACGCATTTC GGCGCGTCGA CCACGTTTCT CGCGGGCGCC
GCGCTGGTCG TGGTGCCGCT GTGCCTGTGC CGGTTCATGC CGCGGCCGGG CACGTCGGCG
GCGTGA
 
Protein sequence
MSVPSPIAGK RAIPRTVWAL GLVSLFMDLS SELIHALLPI YLVSTMGMSV VALGILEGAA 
EATAMIVKVF SGAISDWLGR RKGLLLLGYG LAAFTKPLFP LASTPAVVVT ARLLDRVGKG
IRGAPRDALV ADVAPPEIRG ACFGLRQSMD TVGAFLGPLL AIALMLLFAD RIRTVLWFAV
VPAFIAIALI VFGVREPDRA ESQRRFRSPL RWSALREFPR SYWFVVAAGA TFTLARFSEA
FLVLRAQQTG LDAAWIPAVM VAMSVTYSLS AWPVGILSDR LDRRVLLAAG MVLLIAADLL
LGIGASTISM FVGVAVWGLH MGFTQGILAA MVSETSPATL RGTAFGVFNL VSGICMLLAS
SLAGALWTHF GASTTFLAGA ALVVVPLCLC RFMPRPGTSA A