Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3204 |
Symbol | |
ID | 6180949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 105189 |
End bp | 106394 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641682979 |
Product | major facilitator transporter |
Protein accession | YP_001809893 |
Protein GI | 172062242 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTTC CATCACCGAT TGCCGGCAAG CGTGCGATTC CGCGGACCGT GTGGGCGCTG GGCCTCGTCA GCCTGTTCAT GGACCTGTCG TCCGAGCTGA TCCATGCGCT GTTGCCGATC TATCTGGTGT CGACGATGGG GATGAGCGTC GTCGCGCTCG GCATCCTCGA AGGAGCGGCC GAGGCAACCG CGATGATCGT GAAGGTGTTC TCCGGCGCGA TCAGCGACTG GCTCGGGCGC CGCAAGGGAT TGCTGCTGCT CGGCTACGGC CTCGCGGCGT TCACCAAGCC GTTGTTTCCG CTCGCGTCCA CCCCGGCCGT GGTCGTGACG GCCCGGCTGC TCGATCGCGT CGGCAAGGGG ATTCGCGGCG CGCCGCGGGA CGCGCTGGTG GCCGACGTCG CACCGCCCGA AATCCGCGGC GCGTGCTTCG GCCTGCGTCA GTCGATGGAT ACCGTGGGCG CGTTTCTCGG CCCGCTGCTC GCCATCGCGC TGATGTTGTT GTTCGCGGAC CGCATCAGGA CCGTGCTCTG GTTCGCCGTG GTGCCGGCGT TCATCGCGAT CGCGCTGATC GTCTTCGGCG TGCGCGAGCC CGATCGGGCG GAATCGCAAC GGCGCTTTCG CTCGCCGCTG CGCTGGAGCG CGCTGCGCGA GTTTCCGCGC AGCTACTGGT TCGTCGTCGC GGCCGGCGCG ACCTTTACAC TCGCGCGTTT CAGCGAGGCG TTCCTGGTGC TGCGCGCGCA GCAGACGGGG CTCGACGCCG CATGGATCCC GGCGGTGATG GTCGCGATGA GCGTCACCTA TTCGCTGTCC GCGTGGCCGG TCGGCATCCT GTCGGACCGG CTGGATCGCC GCGTGCTGCT CGCGGCCGGC ATGGTGCTGC TGATCGCGGC CGACCTGCTG CTGGGCATCG GCGCGTCGAC GATCTCGATG TTCGTCGGCG TGGCCGTGTG GGGGCTGCAC ATGGGCTTTA CGCAGGGCAT CCTCGCCGCG ATGGTGTCGG AAACCTCGCC GGCCACGCTG CGCGGCACCG CGTTCGGCGT ATTCAATCTC GTGAGCGGCA TCTGCATGCT GCTCGCGAGC AGCCTCGCCG GCGCGCTGTG GACGCATTTC GGCGCGTCGA CCACGTTTCT CGCGGGCGCC GCGCTGGTCG TGGTGCCGCT GTGCCTGTGC CGGTTCATGC CGCGGCCGGG CACGTCGGCG GCGTGA
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Protein sequence | MSVPSPIAGK RAIPRTVWAL GLVSLFMDLS SELIHALLPI YLVSTMGMSV VALGILEGAA EATAMIVKVF SGAISDWLGR RKGLLLLGYG LAAFTKPLFP LASTPAVVVT ARLLDRVGKG IRGAPRDALV ADVAPPEIRG ACFGLRQSMD TVGAFLGPLL AIALMLLFAD RIRTVLWFAV VPAFIAIALI VFGVREPDRA ESQRRFRSPL RWSALREFPR SYWFVVAAGA TFTLARFSEA FLVLRAQQTG LDAAWIPAVM VAMSVTYSLS AWPVGILSDR LDRRVLLAAG MVLLIAADLL LGIGASTISM FVGVAVWGLH MGFTQGILAA MVSETSPATL RGTAFGVFNL VSGICMLLAS SLAGALWTHF GASTTFLAGA ALVVVPLCLC RFMPRPGTSA A
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