| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3195 |
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| Symbol | |
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| ID | 6181259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 95813 |
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| End bp | 96517 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641682970 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_001809884 |
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| Protein GI | 172062233 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCACC ATGCGGGCCA TCCCGAATCG AAGCCGTTGC CGCTTGCGGA AGAAGACGAC
CGTACGCTCG CCGCGCGCGT CGCGAGCGGC GAGCGCGCCG CGTTCGAACA GCTGATGCGT
CGCTACAACC GGCGGCTCTA CCGGCTTGCA CGGGTGACGT TGCGCGACGA CGCCGAAGCC
GAGGATGCAC TGCAGGAGGC TTACCTCGCG GCGTTCCGCG CAATCCCGCG TTTTCGCGGC
GACGCGTCGC TGTCGACCTG GCTGTCGCGG CTCGTGCTCA ACGAGTGCTT GACGCGTCAG
CGCCGCGGCG CGCGGCGCGA CACGATCGCG CCGATGGTCC GGCTGTCGAC CATCGCCGAC
TTCGAGCGGG AAACCATGGA TGCAGACCAG AACGAATCGC CGGACCGTGC GCTGATGCGC
ACCGAATTGC GCACCTTGCT GGAGCGCAAG CTCGATGCGT TGCCCGAAGC GTTTCGCATC
GTGTTCGTGA TGCGCTGCGT CGAGGAATTC AGCGTCGAGG AAACCGCCGA GTGCCTCGGC
ATACCCGAGG CGACGGTGCG CTCACGGCAT TTCCGGGCAA GGAGCATGCT GCGCGAGTCG
CTCGCCCGGG ATATCGATCT GGCCGAGCGC GACGTGTTTT CGTTCGACGG GGAACGGTGC
GATCGCATCG TGCACGGTGT GCTGGCGAAA AGCGCTTCGC GTTGA
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| Protein sequence | MTHHAGHPES KPLPLAEEDD RTLAARVASG ERAAFEQLMR RYNRRLYRLA RVTLRDDAEA
EDALQEAYLA AFRAIPRFRG DASLSTWLSR LVLNECLTRQ RRGARRDTIA PMVRLSTIAD
FERETMDADQ NESPDRALMR TELRTLLERK LDALPEAFRI VFVMRCVEEF SVEETAECLG
IPEATVRSRH FRARSMLRES LARDIDLAER DVFSFDGERC DRIVHGVLAK SASR
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