Gene BamMC406_3188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3188 
Symbol 
ID6180382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp88929 
End bp90617 
Gene Length1689 bp 
Protein Length562 aa 
Translation table11 
GC content57% 
IMG OID641682963 
Producthypothetical protein 
Protein accessionYP_001809877 
Protein GI172062226 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTAA CTCTAATAAT TCTTGTCATC CTCGTCGCCG TGCTGCTGTG GCGATACTCC 
GTCGCATCCC AAGCGTTGTC AGCAATCAAA GAGGAGGCCG CCAACCTCGG TGTGCGCTTC
GAAGCATTGC GAACAGCAAA GGAGGAAGAC GATGCTACGA ACGCGCATGC GATTGCCGAT
TTGCGCCGGC AACTGGCGAC TGCGGCGGCG GACAGAGACT CGCTCTCCAA GTTTGTCGAC
ATACGTGACA CTGTTCTCGA GGCTGACCGC ATCAGGTCCG AAGCTGCTCA AATCCTGAGG
TTCGCTGAGC ACAAGTCCGC GGCGTCGGTC GCAGCGGCCG ATGAAGAGGC GACACGTTTG
GTGGCAGAAG CGACGGCTGA GGCCAAGCAG AGGCGTGGTG AAGCGGAGCA GATGATTTCG
CGTGCGAGCT TGCAAGCGGC GAAGGTTATC GACGACGCTC GTGCGCGGGC GGACGAAATC
GGCGGGGATG CTTTCCGTGC GCTGGAGGAT GCCGAGCGCC TGACAGCGAC CGTGGCGGCC
ATGAAGAACG TTATTGATGG CTACGGGGAT TCATACATGA TTCCCAGCCA CAGTTTGCTC
GATGACCTGG CTGAAACCTA TTCGCATACG GAGGCCGGTA AGCAACTTAA AGTTGCGCGC
GACTACTCGA AATTGATGGC AACACAGAAA CGGGCTGCGG AGTGCGATTA CGTGGAGAAA
ATCCGCCGTG ATACTGCTAT CAGATTTGTG GTTGACGCCT TTAACGGGAA GGTGGATTCC
ATCCTTTCGC GGGCTAAAGT GGACAACTTT GGCACATTGC AACAAGAAAT CAAGGATGCC
GCTGCACTGG TGAACCATAA CGGCAGCGCA TTCCGGAATG CACGGATTTT GAAGGAATAC
ATCGACGCGC GTATCGACGA ACTGGTCTGG GCAGTACGGA CCTACGAGCT TCGCGAGCGC
GAGAAGGAGG AGCAGCGGCA GATCCGTGAG CAGATGCGTG AGGAGGAGAA GGCGCGTCGG
GAGTATGAGC GTGCGATGCG TGATGCTGCG AAGGAGCAAG ACCTTATTCG TCGCGCGATG
GAGAAGGCGC AAAGTCAGAT TGCTCGAGCA ACGGAGGCGC AGAAAGCGCA GTTCGAGGCT
CAGCTTGCCG AGCTCGAAGA AAAGTTGCGA CAAGCAGAAG AAAAGAACCA GCGTGCGCTT
TCGATGGCGC AGCAAACGAA AGCCGGTCAT GTCTACATCA TTTCCAACAT CGGCTCGTTC
GGCGAGCACG TATACAAAGT TGGTCTGACA CGCCGTCTTG AGCCGCTGGA TCGCGTTCGA
GAGCTTGGTG ATGCGAGCGT ACCGTTCTCC TTTGATGTCC ACGCGATGAT TTGGTCCGAG
GATGCTCCGG AACTCGAGCG GACGTTGCAT CGCAAGTTTT TCGAGGCGCA GGTTAACAAG
GTGAATCCGC GCAAGGAGTT CTTCCGCGTG GGCCTCGCGG ATTTGCGGGC AACTGTCGAG
GACATGGGCC TGAACGTGTC GTGGACGATG ACGGCTGCCG CCGCGCAATA TCGTGAGAGT
CTTGCGATTG CGCGTCAGAT CGAGTCGGAC CCGGAGCTGC GCGACAAGTG GTTCAAGCAG
CAAATCGCGT ACGAGGCGGC GTTGGAGAAC GACGAGGAGA GTGAGACGGA GGCTCCGACC
GTCGCTTAA
 
Protein sequence
MALTLIILVI LVAVLLWRYS VASQALSAIK EEAANLGVRF EALRTAKEED DATNAHAIAD 
LRRQLATAAA DRDSLSKFVD IRDTVLEADR IRSEAAQILR FAEHKSAASV AAADEEATRL
VAEATAEAKQ RRGEAEQMIS RASLQAAKVI DDARARADEI GGDAFRALED AERLTATVAA
MKNVIDGYGD SYMIPSHSLL DDLAETYSHT EAGKQLKVAR DYSKLMATQK RAAECDYVEK
IRRDTAIRFV VDAFNGKVDS ILSRAKVDNF GTLQQEIKDA AALVNHNGSA FRNARILKEY
IDARIDELVW AVRTYELRER EKEEQRQIRE QMREEEKARR EYERAMRDAA KEQDLIRRAM
EKAQSQIARA TEAQKAQFEA QLAELEEKLR QAEEKNQRAL SMAQQTKAGH VYIISNIGSF
GEHVYKVGLT RRLEPLDRVR ELGDASVPFS FDVHAMIWSE DAPELERTLH RKFFEAQVNK
VNPRKEFFRV GLADLRATVE DMGLNVSWTM TAAAAQYRES LAIARQIESD PELRDKWFKQ
QIAYEAALEN DEESETEAPT VA