| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3172 |
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| Symbol | |
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| ID | 6181509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 70565 |
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| End bp | 71965 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641682947 |
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| Product | RNA-directed DNA polymerase (Reverse transcriptase) |
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| Protein accession | YP_001809861 |
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| Protein GI | 172062210 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCGC CGGCCGGTTC GACGTACCGG GAGATTTTCG CAAGCGCAAA TCTGCGCAGG
ATCTACGACG AGCACATCGC GAAATCGAGC GCAATCGGCA TCGACCGGAT CAACCGCCCG
ACATTCGAGA AAGTGCTGAG GAGTGAGATT GCGCTGATCC GCAGGAAGTC GGCCAACTCC
ACCTATCGCT TCTCCCAGTA CCGAGAAAAG CTAGTCTCCA AGGGCTCGGG GCGGCCGCCG
CGGGTCATTT CAATCGCAAC GTTTCGCGAC CGGATCACGC TGCGCGCCCT GTGCGACTTC
CTGCGAGCAC GCTTCCAGGA CCAGCTTAAC CTGCAGATTC CTCAGGTCGT GATTCATCGA
CTCAAGGAAG AAATTGCCAC AGGCAAATAC AGCTCGTTCA TCAAGCTCGA TGTGCGCGAC
TTCTATCCAT CGATCCCTCA TGCGCTCCTT CGGGCGCAGG TCACGACCAG ACTGAAAAGC
CACAAGGCGG TCGCGCTGCT CGAGCGCGCG ATCGAAACAC CAACGGTATC CGTCGCCGAC
AAGTCAAAGG CAGCGGTTGC TGTGGGTGTC CCCCAGGGCT TGGCCATTTC GAACCTGCTG
GCGGAAATCT TCCTGCATCC GTTCGATACC GCCGTGGCGT CGAAAGTAAA CGTAGCGTAT
TTCCGTTATG TCGATGACGT ATTTGTCCTG ACGTCAGAAC CTCCCGCGCC ACTTTTCGAG
GAGCTGCGAA GCGCGCTGGA AAGCGATTTT GGATTGTCGG TTCATCCGGT AGGAACCGAT
GGGTCCAAAT CGACTTTCGG TCTTGTGACG AATGAGTTTA CTTTCCTCGG CTACCTTTTT
CGAGTCGGCA AGGCGCGTGT CAAGGAGCAA TCCGTCCAGC GACTGGAGCG ATCGCTCGCG
GACATCTTCA CGAGATACAA GTATCGCTGC GAGGAGATCC GGCGTAAGCA TCACTCAAAG
GCGGAGCGTC GCAAGCTGCT GGAATTTGCG AAAAACTCCC TGCTGTGGCG AATCAATCTG
CGCATTACCG GTTGTATTTT CGAGAAGACG CGCAAGGGCT GGGTCTTCTA TTTTTCGCAG
ATTGACGAGT CCAGCCTGGA GCAGTTACGC AAGCTCGATC ACACGGTTGC AAACATGCTA
AACCGCTTCA GGATCAGGCC ACAGACGCCG GTGCGCTCCT TCGTGCGCGC GTATTTCGAA
TGCCATCGCA AGAATCCGAC GGCCACGGGA TACATACCGA ATTTCGATAC CGCATCTGTC
GTGGAAATGC GCCGCATACT GGAGCGCTAC TTTGGTTACA GCGTCCCGGG GATGTCTGAT
GCAGCCGTGA AGGCGAATTT CGCCTTTCGG ATACGGCGCG CCACGAAAGA ACTCGAACTG
GATATTCAGG ATATCTCGTG A
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| Protein sequence | MSAPAGSTYR EIFASANLRR IYDEHIAKSS AIGIDRINRP TFEKVLRSEI ALIRRKSANS
TYRFSQYREK LVSKGSGRPP RVISIATFRD RITLRALCDF LRARFQDQLN LQIPQVVIHR
LKEEIATGKY SSFIKLDVRD FYPSIPHALL RAQVTTRLKS HKAVALLERA IETPTVSVAD
KSKAAVAVGV PQGLAISNLL AEIFLHPFDT AVASKVNVAY FRYVDDVFVL TSEPPAPLFE
ELRSALESDF GLSVHPVGTD GSKSTFGLVT NEFTFLGYLF RVGKARVKEQ SVQRLERSLA
DIFTRYKYRC EEIRRKHHSK AERRKLLEFA KNSLLWRINL RITGCIFEKT RKGWVFYFSQ
IDESSLEQLR KLDHTVANML NRFRIRPQTP VRSFVRAYFE CHRKNPTATG YIPNFDTASV
VEMRRILERY FGYSVPGMSD AAVKANFAFR IRRATKELEL DIQDIS
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