| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3171 |
|---|
| Symbol | |
|---|
| ID | 6180751 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 69936 |
|---|
| End bp | 70568 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641682946 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001809860 |
|---|
| Protein GI | 172062209 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATCCG GCGCCACCCT GAATTTCCCT CCTGCGTTCC AGAAATCCCG CGAAGCACTC
ACCAACCGTA TCTGGTTCAC GAGAAAAGCA AGAATCCAAG CCGAAAAGCG CCTGCTGCAA
AACGATTTTC ACTCGCAGCT GATGCTCCAG ATTTTTACGG CCTATATCCT TGTGCTGTCG
ATCTACATGC TCAAGTTTCA TGCGGGCGGC ATCTCTGACG ACGCAGCCAA TGTGACGCTG
CTGGTGGTGT CCGTGCTGTT GTTCGGCCGG ACGCCCGCGG TCAACTCCCG GAATTTCAAG
GGTCGGGCGG AGGCATTCAA GATTATGTAT GTGAAGCTAC AGCTGCTTCT CGACAATCTG
GCGGATCTGG ACTGGGCGAA TTCGATAGAG GAGGCCCAAC ACGCTTACGC CGAGGTTCAG
CAGGAATACG CGCGCATCAT AGCTGACGGT GAAAACCACT CCGAGATCGA CGACGCGGTC
GCACGGTGGG GCATCACCCA AAGCAGTCGC CCTCTTTCAG TACTGGAGAC GGTAAGCGTT
TTGTTCTATT TCGGCCGTCG TTGGGCCGTC TGGGTCGGTG GCTATGTCGT CCCTCCCGTT
TTCTTTGTTC TCTATTACCT GTACCGGAAA TGA
|
|---|
| Protein sequence | MTSGATLNFP PAFQKSREAL TNRIWFTRKA RIQAEKRLLQ NDFHSQLMLQ IFTAYILVLS
IYMLKFHAGG ISDDAANVTL LVVSVLLFGR TPAVNSRNFK GRAEAFKIMY VKLQLLLDNL
ADLDWANSIE EAQHAYAEVQ QEYARIIADG ENHSEIDDAV ARWGITQSSR PLSVLETVSV
LFYFGRRWAV WVGGYVVPPV FFVLYYLYRK
|
|---|
| |