| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3154 |
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| Symbol | |
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| ID | 6179292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 53604 |
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| End bp | 54407 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641682930 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001809844 |
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| Protein GI | 172062193 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTCAA CGAAGCAAGC GGCGAATGCG CCGGTCGTAC TCGTGACCGG CGCCGCGCGC
CGGGCCGGGC GCGCGTTCGC CGAGTATTTC GCCGCACACG GCTATCGCAC TGCGGTTCAC
TACGACCGCT CAGCCGATGC CGCGCATGCA GCGGCCCGCA CGATCGCCGA ACGCGGGCAC
GACTCCGTCG CGCTGCAGGC CGACCTGTCG GATGCCGCGC AGATCACCGC GCTGATCGAC
CACGTGTATG CGCGCTTCGG CCGCCTCGAC GTGCTGGTCA ACAACGCGTC GGTGTTCTGG
CAGGATCATT TCCCGAGCTT CGACCTCGCG GCGTTCGACC AGGCGTGGGC CGTCAACTGC
CGCGCGCCGA TCCTGCTCAC GCGCGCGTTC TACGAACGGG CCCGTGCGGC CGGCACGCAA
GGCGTCGTCG TGAACGTGGT CGACCAGAAG ATCAAGGAAA ACTTCCACCG CGACCATTTC
AGCTACACGG TCGCGAAGGC CGCGCTCGGC AACCTCACGC AGATGCTCGC GCTGTCGTCG
TCGCCGGTGC TGCGCGTGAA CGCGGTGTTC CCCGGGCTGA TGCTGCCGAG CGACGACCAG
ACGCAAGCCG ACTTCGAACA CGCGAGCCGC GCGTCGACGC CGCTCGCGCG CATCGCCGGC
CCGGAAGACG TCGCGAGCGC GATCCTGCTG CTGACGGGCA GCGCCTACAA CGGCGTGGAT
TTCGTCGTCG ACGCGGGGCA GAACCTGATT CGCGTCGACC AGGACGTGCT GTACAAGCAT
CGCTCGCCGG CCGGCAAGCA CTGA
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| Protein sequence | MQSTKQAANA PVVLVTGAAR RAGRAFAEYF AAHGYRTAVH YDRSADAAHA AARTIAERGH
DSVALQADLS DAAQITALID HVYARFGRLD VLVNNASVFW QDHFPSFDLA AFDQAWAVNC
RAPILLTRAF YERARAAGTQ GVVVNVVDQK IKENFHRDHF SYTVAKAALG NLTQMLALSS
SPVLRVNAVF PGLMLPSDDQ TQADFEHASR ASTPLARIAG PEDVASAILL LTGSAYNGVD
FVVDAGQNLI RVDQDVLYKH RSPAGKH
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