| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3138 |
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| Symbol | |
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| ID | 6180669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 37061 |
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| End bp | 38659 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641682914 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001809828 |
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| Protein GI | 172062177 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATA GAACTTTCGA TTACATCGTC ATTGGCGCCG GCTCGGCGGG CTGCACGATC
GCGACCCATC TCGTCGAGCG CGGCCTCGGC ACCGTGCTGC TGCTGGAAGC GGGCGGCCAC
GACAAGGATC TGTTCATCCA CATGCCGGGC GGGCTGGCGA AGGCGATTCC GCGCTACACG
TGGCCGTATG CGGCCGAGCC GTCGGACGAC GTGAAGGGCC GCTCGATCGC GGTGCCGCAG
GGGCGCGTGC TCGGTGGCTC CAGCTCGGTC AACGGAATGC TGTACGTGCG CGGGCACCGC
AACGACTACG ACCGCTGGGA GGCCGAGTTC GGCTGCACGG GCTGGGGCGC GGACGACATG
CTGCGCTACT TCGCGAAGGC CGAGAACAAC GAATCGCTGA CGGCGCCCTA TCACGGCAAC
AACGGGCATC TGCAGGTCAC GGAGATCCGC TATCGCCATC CGTTGTCGCA GGCGTTCGTG
CGGGCGGGCC AGCAGATGGG GCTCGACTAC CTGGTCGACT ACAACGGCGA GCGGCAGCAG
GGCGTCGGGT TCTATCAGGC GACGATCTTC AACGGCGAGC GCGGCTCCAC GGCGGCGACT
TACCTGAGCG CGATCCGCAA CCGTCCGGAA CTCAGCCTCG AGGTCGATGC GCTGGTCGAG
CGCGTGGAAA TCGAAGGCGG CCGCGCGACC GGCGTCACCT ATCGGCAGGG CAACCGTCGC
GTGACGGCGC GCGCGCGTGC CGAAATCATC GTGTCGGCCG GCGCGATCGG CTCGCCGAAG
ATCCTGCAGT TGTCCGGCAT CGGGCCGCAA AAGGTGCTCG AGGATGCCGG CGTGCAGGTC
AGGCACGTGC TGCCGGTGGG CGAGAACTTC CACGATCACA TGCACATGTC GGTCAATGCG
ACGATCCGCA CGCCGGTGTC GCTCTACGGC CAGGACAAGG GCTGGCGCGC GCTGAAGCAC
GGCATCCAGT GGAAGTGGTT CCGCTCCGGC ATCCTGACGT CGCCGGTGCT CGAAGGGTTC
GCGTTCGTCG ATACCTGCGG GCAGGGGCAG CCGGACGTCC AGTTCCACTT CCTGCCGACG
ATCGACTCGT TCGACGATCC GATCGGCGTG ACGGCGGGTC GCACGCACGG CATCACGATC
AAGACCGGCC ATCTGCAACC GTATTCGCGC GGCCGCGTGA CGATCCGCTC GTCGAACCCG
CTGGAGCTGC CGCGCATCGA CGGCCGCTAT CTGGCCGACC GCCGCGACGT CGACGGCCAG
ATCCGGGCGG CGAAGCTCGC GCTGAAGATC CTGCGCCAGC CGGCGCTCGC GGAGCACGTC
GACGAGATCT TCTCGCCGGA TTGCCCGCCC GACGACGACG CGGCGATCGA GGATTGGGTG
CGCGGCGCGG CGAAGACGGT CTATCACCCG GTCGGCACCT GTCGGATGGG CACGGATGCG
GCGTCGTCCG TCGTCGATCC GCAACTGCGC GTGCACGGTA TCGCGGGGCT GCGCGTGGCC
GACAGCTCGA CGATGCCGAG CATCCCGAGC GGCAACACGA ACGCGCCGAC CATCGCACTC
GCCGAAAAGG CGTCGGACCT GATCGCCAAC GCGGCCTGA
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| Protein sequence | MSDRTFDYIV IGAGSAGCTI ATHLVERGLG TVLLLEAGGH DKDLFIHMPG GLAKAIPRYT
WPYAAEPSDD VKGRSIAVPQ GRVLGGSSSV NGMLYVRGHR NDYDRWEAEF GCTGWGADDM
LRYFAKAENN ESLTAPYHGN NGHLQVTEIR YRHPLSQAFV RAGQQMGLDY LVDYNGERQQ
GVGFYQATIF NGERGSTAAT YLSAIRNRPE LSLEVDALVE RVEIEGGRAT GVTYRQGNRR
VTARARAEII VSAGAIGSPK ILQLSGIGPQ KVLEDAGVQV RHVLPVGENF HDHMHMSVNA
TIRTPVSLYG QDKGWRALKH GIQWKWFRSG ILTSPVLEGF AFVDTCGQGQ PDVQFHFLPT
IDSFDDPIGV TAGRTHGITI KTGHLQPYSR GRVTIRSSNP LELPRIDGRY LADRRDVDGQ
IRAAKLALKI LRQPALAEHV DEIFSPDCPP DDDAAIEDWV RGAAKTVYHP VGTCRMGTDA
ASSVVDPQLR VHGIAGLRVA DSSTMPSIPS GNTNAPTIAL AEKASDLIAN AA
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