| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3135 |
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| Symbol | |
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| ID | 6181482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 32520 |
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| End bp | 34757 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641682911 |
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| Product | hypothetical protein |
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| Protein accession | YP_001809825 |
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| Protein GI | 172062174 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1944] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00702] uncharacterized domain
[TIGR03604] bacteriocin biosynthesis docking scaffold, SagD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.535305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGATG ACCTTTCGCG CGTGTTGCGC TTCAAGCCGC ATTTGCTCGT GCTCGATGCG
GGGCCCGAAA CCCTGTTCGT CGTCGACGAG TTCAAGCGCA CGATGCTGTC CGGCGCGATC
TTCGTGCGGA TCGCCGCGTG CCTGCGGGCG CGCATGACGA CCGCCGAGAT CGTGACGACG
CTTGCCGGCA CGTTCGGCGA ATGGGACGTG CTCGCCCGGC TCGACCACCT GGTGCGCCGC
GGCTACGTGC GCGCCGATCC GCCGCACGAC GACGACGCGG CGCGCGGCTT CTTCGAGCGC
GCCGGACTCG ACGGCGACGC GGCTTGTGCG CGCGTCGTTC AACTGCGCGT CGCGGTCGAG
GCGTTCGGCG CCGACGATGC GGCGCTCAGG CGCGCGCTCG ACACGGCCGG CATCGATGTC
GTGCCGGACG CCGAACTGAC CGTCGCGATC GCCGATACGC ACGACCGCGA CGATCTCGCC
GCGTGCGCCG CGCGCGTCGC AGCGCGCGGC GGCGCATTGC TCGTCGTGGC GGCCGGCGGC
GTGCAGACGC TGATCGGGCC GTTGCTGGCC GGCGGCGGCG CGCTGGCCGA TGCGCCGTGC
ATCGAATGCG TGCGCTACTG GATTCGCCTC AATCGGCCGG TCGAGGCACT GCTTGCGCGC
CATCACGGCA GCGCGGCAAC GCGTCTGCCG CCGGTCGCGT CGCGTGCCGG CGCCGCTGCC
GCCGCGGCGC TCGTGACGGC GACGGTCGAG CAGATCGCGG TCAACCGCAC GATAGCGGAG
CGTTCGCAAA CGCATCTCGT GGCGCAGCGC ATCGATACGT TGACCGTCGA ACGGCACCGC
GTGATGAGGC GTCCGCAATG CCCGTGCTGC GGCAATCCCG CATGGATGCG CGAGCAGGCG
GCGCGGGCGC CGCGGCTCGC CGATCATGCG CCGTTGACAC GTGCCGACGG CGGCTACCGG
ACCGCCGATC CGCAACAGGT GTTCGAACGT CATGCGCATC TGATCTCGCC GGTGAGTGGC
GCGATCGCGT ATCTGCATCC GATGCCGAAG CGGCACGCGG GCCTGCGCAA GGTCTATGCG
TCGGGCTTTC TGGTGTGCCC GGCGGCTGTG CCGGGCAGCA ACCGGTTCGA CAGGATCTGT
TCGGGCAAGG GCCGCACCGA CGAGCAAGCC CGCGTGAGCG CGCTATGCGA AGCGCTCGAA
CGATACAGCA GCGTGTATCA GGGCGACGAG GCGAAGTTCA CCGGCAGCAT GGAAAGCCTG
CTCGCCGATC CGGCTTGCGA CGCCGAGCCC GTCCACGTGA ACGAGCTTCA GCAGTTCAGC
GAACGGCAAT TCGATGCGCG CGACGCGATC AATGCATTGA CCCGCGATGT CCGCAAGCAG
GTGCCGCCGC GCTTCACGTC GCGCGACGTG ATCGACTGGA CGCCTGCATG GTCGCTCGTG
AGCGGCGGGC GCCGCCTCGT GCCGCTGAGC TACTGCTATG CGGAAACGCC GGACAGTGCG
CAGGCGCCGG CCGCGTGCGT GCACAACCCG AACGGTTGCG CGGCGGGTGC GAGCATCGAC
GAGGCAATTC TGCAAGGCAT GCTCGAATTG ATCGAGCGCG ATGCGGTCGC GATCTGGTGG
TACAACCGGC TTGCACGCCC CGGCATCGAT CTCGCGAGTT TCGATGATCC GTATTTCGAC
GCGCTCGTGC GTGAATACGC GACGCTCGGG TGGCGTTTGT GGGCACTGGA CATCACGACC
GATCTCGCGG TGCCGACCGT GGCCGCGCTC GCGGAGAATC CGCAAGACGG GCGCTTCTCG
ATCGGCTTCG GCTGCCATCC GGACGGCCGG ATCGCGGTGC AGCGGGCACT GACCGAAGTC
AACCAGTTGC TCGATGTCGC CGCGGATGCG CCGCATCCGT GGGACCGCGA CAAGCTCCCG
GCCACCGGAT TTCTGTATCC GGCGGCGGGC GCGCGTGCAA CGACGCATTC GACTTGGGAA
CCGGTCGATG CCGCGTCGCT ACCGGCGGCG CTCGCGCATT GCATCGGGCG CATCGCGGCG
GCCGGCATGG ACGTGCTCGT CGTCGACAAG ACGCGGCCCG ACATCGGCTT GTCCGTGGTG
CAGGTCATCG CGCCGGGGCT GTGCCATTTC TGGCCGCGGT TCGGCGCGCG GCGGTTGTAT
TCGGTTCCGG TCGAACGGGG TTGGCGTGCG CAGCCGTGCG ATGAAACGGA GCTGAATCCC
GCGCTGCTGT TTCTGTGA
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| Protein sequence | MLDDLSRVLR FKPHLLVLDA GPETLFVVDE FKRTMLSGAI FVRIAACLRA RMTTAEIVTT
LAGTFGEWDV LARLDHLVRR GYVRADPPHD DDAARGFFER AGLDGDAACA RVVQLRVAVE
AFGADDAALR RALDTAGIDV VPDAELTVAI ADTHDRDDLA ACAARVAARG GALLVVAAGG
VQTLIGPLLA GGGALADAPC IECVRYWIRL NRPVEALLAR HHGSAATRLP PVASRAGAAA
AAALVTATVE QIAVNRTIAE RSQTHLVAQR IDTLTVERHR VMRRPQCPCC GNPAWMREQA
ARAPRLADHA PLTRADGGYR TADPQQVFER HAHLISPVSG AIAYLHPMPK RHAGLRKVYA
SGFLVCPAAV PGSNRFDRIC SGKGRTDEQA RVSALCEALE RYSSVYQGDE AKFTGSMESL
LADPACDAEP VHVNELQQFS ERQFDARDAI NALTRDVRKQ VPPRFTSRDV IDWTPAWSLV
SGGRRLVPLS YCYAETPDSA QAPAACVHNP NGCAAGASID EAILQGMLEL IERDAVAIWW
YNRLARPGID LASFDDPYFD ALVREYATLG WRLWALDITT DLAVPTVAAL AENPQDGRFS
IGFGCHPDGR IAVQRALTEV NQLLDVAADA PHPWDRDKLP ATGFLYPAAG ARATTHSTWE
PVDAASLPAA LAHCIGRIAA AGMDVLVVDK TRPDIGLSVV QVIAPGLCHF WPRFGARRLY
SVPVERGWRA QPCDETELNP ALLFL
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