Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3125 |
Symbol | |
ID | 6180063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 21260 |
End bp | 22045 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641682901 |
Product | 3-hydroxybutyrate dehydrogenase |
Protein accession | YP_001809815 |
Protein GI | 172062164 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAACC TGAATGGCAA GACCGCAGTC GTCACGGGCG CCGCAAGCGG CATCGGCAAG GAAATCGCAC TGGAGCTGGC CAAGGCGGGC GCGGCGGTCG CGATCGCCGA CCTGAACCAG GACGGCGCGA ACGCGGTTGC CGACGAGATC AATAAGGCAG GCGGCAAGGC GATCGGCGTC GCGATGGACG TGACCAATGA GGACGCCGTG AACAGCGGCA TCGACAAGGT CGCCGAAGCG TTCGGCTCGG TCGACATCCT CGTATCGAAC GCCGGCATTC AGATCGTCAA TCCGATCGAG AACTACTCGT TCTCCGACTG GAAGAAGATG CAGGCGATCC ATGTCGACGG CGCATTCCTG ACGACGAAGG CCGCGCTCAA GCACATGTAC AAGGATGATC GCGGCGGCGT CGTGATCTAC ATGGGCTCGG TGCACTCGCA CGAAGCGTCG CCGCTGAAGT CGGCCTACGT GACGGCCAAG CACGGCCTGC TCGGCCTCGC GCGCGTGCTG GCGAAGGAAG GCGCGAAGCA CAACGTGCGC TCGCACGTCG TGTGTCCGGG CTTCGTGCGC ACGCCGCTGG TCGACAAGCA GATTCCGGAG CAGGCGAAGG AGCTCGGGAT CAGCGAAGAG GAAGTGATCA AGAAGGTGAT GCTCGGCAAC ACGGTCGACG GCGTGTTCAC GACGGTGCAG GACGTCGCGC AGACGGTGCT GTTCCTGTCG GCGTTCCCGA GCGCCGCGCT CACGGGGCAG TCGTTCATCG TCAGCCACGG CTGGTTCATG CAGTAA
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Protein sequence | MSNLNGKTAV VTGAASGIGK EIALELAKAG AAVAIADLNQ DGANAVADEI NKAGGKAIGV AMDVTNEDAV NSGIDKVAEA FGSVDILVSN AGIQIVNPIE NYSFSDWKKM QAIHVDGAFL TTKAALKHMY KDDRGGVVIY MGSVHSHEAS PLKSAYVTAK HGLLGLARVL AKEGAKHNVR SHVVCPGFVR TPLVDKQIPE QAKELGISEE EVIKKVMLGN TVDGVFTTVQ DVAQTVLFLS AFPSAALTGQ SFIVSHGWFM Q
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