| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3116 |
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| Symbol | tdh |
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| ID | 6181075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 11599 |
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| End bp | 12627 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641682892 |
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| Product | L-threonine 3-dehydrogenase |
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| Protein accession | YP_001809806 |
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| Protein GI | 172062155 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR00692] L-threonine 3-dehydrogenase
[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.717555 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCAC TGGCAAAGCT CGAACGCGGC CCGGGCCTCA CGCTCACGCG CGTGAAGCGC
CCCGAAGTCG GACACAACGA CGTGCTGATC AAGATTCACC GCACGGCGAT CTGCGGCACC
GACATCCATA TCTGGAAGTG GGACGACTGG GCGCAGAAAA CGATTCCCGT GCCGATGCAT
GTCGGCCACG AATACGTCGG CGAGATCGTC GAGATGGGGC AGGAAGTGCG CGGCTTCGCG
ATCGGCGATC GCGTGTCCGG CGAAGGCCAT ATCACGTGCG GCTTCTGCCG CAACTGTCGC
GCGGGGCGCC GGCATCTGTG CCGCAACACC GTCGGCGTCG GTGTGAACCG CGAGGGTGCG
TTCGCCGAGT ATCTGGCGAT TCCCGCGTTC AACGCGTTCA AGATCCCGCC CGAGATTTCG
GACGATCTCG CGTCGATCTT CGATCCGTTC GGCAACGCGA CGCACACGGC GCTGTCGTTC
AATCTCGTCG GCGAGGACGT GCTGATCACC GGCGCGGGCC CGATCGGCGT GATGGCCGCC
GCGATCGCGA AGCATGTCGG CGCACGCAAT GTCGTGATCA CCGACATCAA CGACTACCGG
CTCGAACTCG CGCGCAAGAT GGGTGCGACG CGCGCGGTCA ACGTGTCGCG CGAGTCGCTG
CGCGACGTGA TGGCCGACCT GCACATGACG GAAGGCTTCG ACGTCGGCCT CGAGATGTCG
GGCGTGCCGA GCGCGTTCAC CAGCATGCTC GAGGCGATGA ATCACGGCGG GAAGGTCGCG
CTGCTCGGCA TTCCGCCCGC GCAGACGGCG ATCGACTGGA ACCAGGTGAT CTTCAAGGGG
CTCGAGATCA AGGGCATCTA TGGTCGCGAG ATGTTCGAGA CCTGGTACAA GATGGTCGCG
ATGCTGCAAA GCGGTCTCGA TCTGTCGCCG ATCATCACGC ATCGCTTTGC GGCCGACGAT
TACGAGAAAG GCTTCGCCGC GATGCTGTCC GGTGAAAGCG GCAAGGTGAT TCTCGACTGG
ACGGTCTGA
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| Protein sequence | MKALAKLERG PGLTLTRVKR PEVGHNDVLI KIHRTAICGT DIHIWKWDDW AQKTIPVPMH
VGHEYVGEIV EMGQEVRGFA IGDRVSGEGH ITCGFCRNCR AGRRHLCRNT VGVGVNREGA
FAEYLAIPAF NAFKIPPEIS DDLASIFDPF GNATHTALSF NLVGEDVLIT GAGPIGVMAA
AIAKHVGARN VVITDINDYR LELARKMGAT RAVNVSRESL RDVMADLHMT EGFDVGLEMS
GVPSAFTSML EAMNHGGKVA LLGIPPAQTA IDWNQVIFKG LEIKGIYGRE MFETWYKMVA
MLQSGLDLSP IITHRFAADD YEKGFAAMLS GESGKVILDW TV
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