Gene BamMC406_3115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3115 
Symbol 
ID6181074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp10386 
End bp11585 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content67% 
IMG OID641682891 
Product2-amino-3-ketobutyrate coenzyme A ligase 
Protein accessionYP_001809805 
Protein GI172062154 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID[TIGR00858] 8-amino-7-oxononanoate synthase
[TIGR01822] 2-amino-3-ketobutyrate coenzyme A ligase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.601738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.545145 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGATG CCTTTCTCGC CCAGGTGCGC GGGACGCTCG ACCAGATCCG CGCGGACGGT 
TTTTACAAGA CCGAGCGCGA GATCGCGAGT CCCCAGGCGG CGGCCGTGCG GCTGGCCGGC
GGTGCCGGCG TGCTGAATTT CTGCGCGAAC AACTATCTGG GCCTGGCGAA CGATCCGCGC
CTGGTCGCCG CTGCGCAGGC CGGTCTCGAG CAGGACGGCT TCGGCATGGC ATCGGTGCGC
TTCATCTGCG GCACGCAAAC CGTGCACAAG CAGCTCGAAA GCGCGCTGGC GTCGTTTCTC
GGCACCGAGG ACAGCATCCT CTATTCGAGC TGCTTCGATG CGAACGGTGG GCTGTTCGAG
ACGCTGCTCG ACGAGAACGA CGCGGTGATC AGCGACGAGC TGAACCACGC GAGCATCATC
GACGGCATCC GCCTCTGCAA GGCGAAGCGT TTCCGCTACA AGAACAACGA CCTGTCGGAC
CTCGAGGCGA AGCTGAAGGA AGCCGACGCC GCGGGCGCGC GCCACAAGCT GATCGCGACC
GACGGCGTGT TCTCGATGGA CGGCATCATC GCCGACCTGA AAGGCATCTG CGACCTCGCC
GATCGTTATG GCGCACTCGT GATGGTCGAC GATTCGCACG CGGTCGGCTT CATCGGCGCG
CATGGTCGCG GCACGCCGGA GCACTGCGGC GTCGACGGTC GCGTCGACAT CATCACCGGC
ACGCTCGGCA AGGCGCTGGG CGGCGCATCG GGCGGCTATG TCGCCGCGCG TCGCGAAGTG
ATCGAGCTGC TGCGCCAGCG TTCGCGCCCG TATCTGTTCT CGAACACGCT GACACCGAGC
ATCGCCGCGG CATCGCTGAA GGTGCTGGAG CTGCTCGGCA GCGACGAAGG CGCGAAGTTG
CGCGAACGCG TGCGCGAGAA CGGCGCGCGG TTCCGCGAGC AGATGACCGC CGCAGGCTTC
ACGCTCGTGC CGGGCGCCCA TCCGATCATC CCGGTGATGC TCGGCGACGC GCAGCTCGCA
ACTAACATGG CCGACAAGTT GCTCGCCGAA GGCGTCTACG TGATCGGCTT CTCGTTCCCG
GTCGTGCCCC GCGGTCGCGC GCGCATCCGC ACGCAGATGA GCGCCGCGCA TACCCCCGAA
CAGATTGATC AGACGGTCGC CGCGTTCGTA CGCGTCGGCA AGTCGCTCGG CATCATCTGA
 
Protein sequence
MRDAFLAQVR GTLDQIRADG FYKTEREIAS PQAAAVRLAG GAGVLNFCAN NYLGLANDPR 
LVAAAQAGLE QDGFGMASVR FICGTQTVHK QLESALASFL GTEDSILYSS CFDANGGLFE
TLLDENDAVI SDELNHASII DGIRLCKAKR FRYKNNDLSD LEAKLKEADA AGARHKLIAT
DGVFSMDGII ADLKGICDLA DRYGALVMVD DSHAVGFIGA HGRGTPEHCG VDGRVDIITG
TLGKALGGAS GGYVAARREV IELLRQRSRP YLFSNTLTPS IAAASLKVLE LLGSDEGAKL
RERVRENGAR FREQMTAAGF TLVPGAHPII PVMLGDAQLA TNMADKLLAE GVYVIGFSFP
VVPRGRARIR TQMSAAHTPE QIDQTVAAFV RVGKSLGII