Gene BamMC406_3114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3114 
Symbol 
ID6181073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand- 
Start bp9613 
End bp10224 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content69% 
IMG OID641682890 
ProductXRE family transcriptional regulator 
Protein accessionYP_001809804 
Protein GI172062153 
COG category[K] Transcription 
COG ID[COG1476] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.935644 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.475898 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGTT CCTCCGCGTC GCGGCGCACG CCTGCCGGCG CCGCACCGCA ATCGCCGGGC 
GTGACGCCGC CACGGGTCGG CGAGCAAATC CAGCGCCTGC GCAACGAGCG CAAGCTGACG 
CTCGACGACC TGTCGCGCGC GGCCGGCGTA TCGAAGTCGA TGCTCTCCGA GATCGAGCGC 
GACAAGGCCA ATCCGACGAT CGCGGTTGCG TGGCGGCTCA CCAATGCGCT CGGCATCACG 
CTCGACGAAC TGTTCTCGCA ACCGAAGGCG GCGGAGACGA TCCGCGTGGA CGGCCCGCAC 
GACATTCCGA CGCTCGCCGG TCACGACGGC CGCTATCAGC TGCGCGTATG GGGCCCGATC 
GACCTGGCCG GCAAGTTCGA GTGGTATGAA CTCACGCTGC CGGGCGGCGG CGCGCTCGTG 
TCGAACGCGC ACGAACCCGG CACGCGCGAG CACCTCACCG TGCTACACGG CGCGATGGAA 
ATCGAAGCCG CGGCCGCGAG CCGGCGCCTG AAGGCGGGCG ACACCGCACG CTACGCGGCC 
GACACGCCGC ATGCGATCCG CAACCCCGGC AAGGCCGAAG CGCGCGCATT ACTGATCGTG 
ATTCATCGCT GA
 
Protein sequence
MASSSASRRT PAGAAPQSPG VTPPRVGEQI QRLRNERKLT LDDLSRAAGV SKSMLSEIER 
DKANPTIAVA WRLTNALGIT LDELFSQPKA AETIRVDGPH DIPTLAGHDG RYQLRVWGPI 
DLAGKFEWYE LTLPGGGALV SNAHEPGTRE HLTVLHGAME IEAAAASRRL KAGDTARYAA 
DTPHAIRNPG KAEARALLIV IHR