Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3114 |
Symbol | |
ID | 6181073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 9613 |
End bp | 10224 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641682890 |
Product | XRE family transcriptional regulator |
Protein accession | YP_001809804 |
Protein GI | 172062153 |
COG category | [K] Transcription |
COG ID | [COG1476] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.935644 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.475898 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAGTT CCTCCGCGTC GCGGCGCACG CCTGCCGGCG CCGCACCGCA ATCGCCGGGC GTGACGCCGC CACGGGTCGG CGAGCAAATC CAGCGCCTGC GCAACGAGCG CAAGCTGACG CTCGACGACC TGTCGCGCGC GGCCGGCGTA TCGAAGTCGA TGCTCTCCGA GATCGAGCGC GACAAGGCCA ATCCGACGAT CGCGGTTGCG TGGCGGCTCA CCAATGCGCT CGGCATCACG CTCGACGAAC TGTTCTCGCA ACCGAAGGCG GCGGAGACGA TCCGCGTGGA CGGCCCGCAC GACATTCCGA CGCTCGCCGG TCACGACGGC CGCTATCAGC TGCGCGTATG GGGCCCGATC GACCTGGCCG GCAAGTTCGA GTGGTATGAA CTCACGCTGC CGGGCGGCGG CGCGCTCGTG TCGAACGCGC ACGAACCCGG CACGCGCGAG CACCTCACCG TGCTACACGG CGCGATGGAA ATCGAAGCCG CGGCCGCGAG CCGGCGCCTG AAGGCGGGCG ACACCGCACG CTACGCGGCC GACACGCCGC ATGCGATCCG CAACCCCGGC AAGGCCGAAG CGCGCGCATT ACTGATCGTG ATTCATCGCT GA
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Protein sequence | MASSSASRRT PAGAAPQSPG VTPPRVGEQI QRLRNERKLT LDDLSRAAGV SKSMLSEIER DKANPTIAVA WRLTNALGIT LDELFSQPKA AETIRVDGPH DIPTLAGHDG RYQLRVWGPI DLAGKFEWYE LTLPGGGALV SNAHEPGTRE HLTVLHGAME IEAAAASRRL KAGDTARYAA DTPHAIRNPG KAEARALLIV IHR
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