| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3096 |
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| Symbol | |
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| ID | 6177954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 3436818 |
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| End bp | 3438176 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641682873 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001809787 |
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| Protein GI | 172062135 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0200719 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00269086 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAGGTA TCCTGATCCA GCACACGACG CGTCGTCAGC TGTGGTTCGG CGCGCTCACG
GCACTCGTGA TCGTGCTCGC GCTCGGGATC GCCGCGCCAC ACGCGAACGT CGCGCTGCCG
GCCGTCGAGC CGTTCATGCC GATGTGCGCG CTGACCGTGT TCACCACCGC GAGCATCGCC
GCATTCTTCC TTGGCGCGCA GTTCACCGTG ACGCGCCAGC CCGTGCTCGG CGCGCTCGGC
GGCGCCTATG CGTTCACCGC GCTCGCCGTC GCGCTGCAGC TGCTGACCTT TCCCGGCGTG
TTCGCGCCGC ATGGGCTGTT CGGCGCACAA CCGCAAAGCG CCGCGTGGAT GTGGATCTTC
TGGCACGCCG GCTTCCCTGG TTTCGTCATG GTCGCGCTGC TCGCGCGTGC TCGGCTGGCG
CGCGCGCCGA TCGGAGCCCG GCAGACGCGC TGGTGGACGC TCGCGCTGGT CGGCGGGCCC
GCTGTCGCCG CCGGCGTGCT GTGCCTGTTC GCGCTGAACG TGTCGCTGCC GCCTGCGTTT
CGTCCGCCGG GCAATGCGGC CGTGCTGCCC GTCAACGGTG TCGCGCTCGT CGTGTGGATG
CTCAATGCGC TGGCGCTCAT GGCCGTGCTG GTCTCCGGCC GGCTGCGCAC GACCCTCGAC
CTCTGGCTCG CGATCGCGGT GCTTGCGTGC CTGACCGATA CGACGCTGAA CCTGTTGAGC
ACCAATCGCT TCACGATCGG CTGGTATCTT GCGCGCGTGT TCAGCATGTT CACGCCGGGC
ATACTCGTGT GCGTGCTCGC GTGGGAAGTG ACGATGCTGT ATCAGCGGCT GTTCGAGGCG
CACACGATGC TCATCCGTTC GTCCGCACGT GACGGGCTGA CGGGCGCGTT CAACCGCAGC
CACTTCAACG ATCACTTTCA CACGCTGTTC CTGCAGGCAC GGCGACAGGG CGAACCGCTG
TCGCTGCTGA TGGTCGACGT CGATCACTTC AAGGCATACA ACGACGCGTT CGGTCACGTG
AAGGGCGATG CGTGCCTGAT CGCGGTCGCG AATGCGCTGG CCGGGGCGGT GCGGCGCCCG
GCGGATATCG TCGCGCGCTA CGGCGGCGAG GAGTTTGCGA TCGTGCTGCC GAACACCGGC
GCGCGCGGTG CGCGGCTCGT TGCCGAGGAA GTGCGCGAAG CCGTGCTGCG GCTCGATCTC
GCGATGCCTT CGTCGCCGGC AGGACGCGTG AGCGTCAGCG TCGGCTGCGC GACCGTGTCG
GCCGACGAGC TGTCGACGCC CGATGCGTTG ATCGAAGCCG CCGATGCCGC GCTGTACCGC
GCGAAGGATG GGGGGAGAAA CCGCGTCGTC GCGGCGTGA
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| Protein sequence | MEGILIQHTT RRQLWFGALT ALVIVLALGI AAPHANVALP AVEPFMPMCA LTVFTTASIA
AFFLGAQFTV TRQPVLGALG GAYAFTALAV ALQLLTFPGV FAPHGLFGAQ PQSAAWMWIF
WHAGFPGFVM VALLARARLA RAPIGARQTR WWTLALVGGP AVAAGVLCLF ALNVSLPPAF
RPPGNAAVLP VNGVALVVWM LNALALMAVL VSGRLRTTLD LWLAIAVLAC LTDTTLNLLS
TNRFTIGWYL ARVFSMFTPG ILVCVLAWEV TMLYQRLFEA HTMLIRSSAR DGLTGAFNRS
HFNDHFHTLF LQARRQGEPL SLLMVDVDHF KAYNDAFGHV KGDACLIAVA NALAGAVRRP
ADIVARYGGE EFAIVLPNTG ARGARLVAEE VREAVLRLDL AMPSSPAGRV SVSVGCATVS
ADELSTPDAL IEAADAALYR AKDGGRNRVV AA
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