Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3089 |
Symbol | |
ID | 6177981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 3431964 |
End bp | 3433055 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641682866 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001809780 |
Protein GI | 172062128 |
COG category | [F] Nucleotide transport and metabolism [L] Replication, recombination and repair |
COG ID | [COG0350] Methylated DNA-protein cysteine methyltransferase [COG2169] Adenosine deaminase |
TIGRFAM ID | [TIGR00589] O-6-methylguanine DNA methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000381417 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0021619 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAACCG CCTATCCGAC CGACGATGCC CGCTGGGGCG CCGTGACCGC CCGCGATCCG CACGCGGACG GCGCGTTCTT CTATGGCGTG CGCACGACCG GCGTGTTCTG CCGCCCGAGC TGCGCGTCGC GGCTGCCGCG GCGCGAGCAT GTGTCGTTCT TCGCCGATCC GGCCGCGGCG CGCGCGGCAG GCTTTCGGCC GTGCAAGCGC TGCCAGCCGG AAGGGCTGCC GCGCGAGCTC GACATCGTCA ATCGCGCATG CGCGGTGCTC GACGCGCATC CGGAGCGGCT CACGCTGCAG CAACTGAGCG ATGCCGTGCA CGTGAGCCCG TTCCACCTGC AGCGGCTGTT CAAGCGCGTG GTCGGGGTGT CGCCGCGGCA GTACCAGGCC GCGCAGCGCG GCGCAGCGCT GCGCGAGGCG CTGCAAAGCG GGCAGCCGGT CACGCAGGCG GCCGTCGACG CGGGTTTCAA TTCACCGTCG CGGCTCTACG CATCGGTGCC GCGCGAGCTG GGGATGGCGC CGTCCGCGTT CCGTCGCCAG GGCGCCGGCC TGCGGATCGA CTATGCGACC GCGTCGACGC CGCTCGGCAC GGTGCTCGTC GCCGCGACCG AACAGGGCAT CTGCCGGATC GCGTTCGGCG ACGAACCGGC GCCGCTCGTC GACGAACTGA AGGCAGCGTT CGCGCGCGCC GAGCTGGTCG ACGCGCCATC GCGGCTTGCG CCGTTCGTCG CGCAGATCCG CGCGTACCTC GACGGCACGC GGCACGCGTT CGACCTGCCG CTCGACATCG CGCCGACCGC GTTCCAGCAG CGCGTCTGGG AAGCGCTGAC ACACATCCCG TACGGCGAAA CGCGCAGCTA CTCGGAGATC GCCGAGGCGC TCGGCTCGCC GCGTGCGGTG CGCGCCGTCG CATCGGCCTG CGCGTCGAAT CCGGTCGCGC TCGCGATTCC GTGCCATCGT GTCGTGCAGA AGGGCGGCGC GCTTGCCGGA TATCGCTGGG GCGTGCGCCG TAAGGCGACG CTGCTGGCGT CCGAGGCGCG CCACGTGCGC GACGATGAAA CCGAAGCCGT TGCGGAGGGC AACGTAGTTT GA
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Protein sequence | MKTAYPTDDA RWGAVTARDP HADGAFFYGV RTTGVFCRPS CASRLPRREH VSFFADPAAA RAAGFRPCKR CQPEGLPREL DIVNRACAVL DAHPERLTLQ QLSDAVHVSP FHLQRLFKRV VGVSPRQYQA AQRGAALREA LQSGQPVTQA AVDAGFNSPS RLYASVPREL GMAPSAFRRQ GAGLRIDYAT ASTPLGTVLV AATEQGICRI AFGDEPAPLV DELKAAFARA ELVDAPSRLA PFVAQIRAYL DGTRHAFDLP LDIAPTAFQQ RVWEALTHIP YGETRSYSEI AEALGSPRAV RAVASACASN PVALAIPCHR VVQKGGALAG YRWGVRRKAT LLASEARHVR DDETEAVAEG NVV
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