| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3087 |
|---|
| Symbol | |
|---|
| ID | 6177992 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 3428885 |
|---|
| End bp | 3430498 |
|---|
| Gene Length | 1614 bp |
|---|
| Protein Length | 537 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641682864 |
|---|
| Product | glutamate--cysteine ligase |
|---|
| Protein accession | YP_001809778 |
|---|
| Protein GI | 172062126 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2918] Gamma-glutamylcysteine synthetase |
|---|
| TIGRFAM ID | [TIGR01434] glutamate--cysteine ligase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00169886 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0244082 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAACA CCATGACTCA CCGCCAGTCC GAACTGCTGC TGAATCGTCT CGAAGCGCTG
AGCTCGGGCC CGACGCGGCA GCATCTGCCC GACGGCCTGC GCGGCATCGA AAAGGAAAGC
CTGCGCGTGA CGCGCGACGG GATGATCGCG TTTACGCCGC ATCCGCGCGC GCTCGGCTCG
GCCCTCACGC ATCCGTCCTT GACGACCGAC TATTCCGAAG CGCTGATCGA ACTGATCACG
CCGGCGGAGC CCGACGCGTC GCTCACGCTC GAACGTCTCG ACGATCTGCA CCGCTACGTG
TATGCGTCGC TCGGCGACGA GATGCTGTGG AACGAATCGA TGCCGGGCCT GTTGCCGGCC
GACGATGAAA TCCCGATCGC CGACTACGGC ACGTCGAACA TCGGCCGCCT GAAGGCGGTG
TACCGCCGCG GCCTCGCGCA TCGCTACGGC CGCACGATGC AGTGCATCGC CGGCATCCAC
TACAACTACT CGCTGCACGA GGAAGTGTGG CGGCGCCTGC ACGCGGACGA AGGCTCGACG
GCCACGCTCG TCGATTACCA GTCGGAGCGC TATCTCGCGC AGATCCGCAA CTTCCGCCGT
CGCAGCTGGC TGCTGATGTA CCTGTTCGGC GCATCACCGG CGCTCGACAC GAAATTCCTG
CGTGGCAAGC CGCACAAGCT CGATGCGTTC GATGCCGACA CGCTGTACCG GCCGTATGCG
ACGAGCCTGC GGATGAGCGA CCTCGGTTAC TCGAACACGA CCGCACAGGC CGCGCTGCAT
GTCGACTACA ACACGCTGCC CGGCTATCTC GACGCGCTGT CGAAGGCCGT GAGCGAGCCG
TATCCGCCGT ACGAGGCGAT CGGTACGCAT CGCGACGGCG AATGGATCCA GATCAACACG
AACGTGCTGC AGATCGAGAA CGAGTTCTAT TCGACGATCC GTCCGAAGCG CATCACGTAT
TCGGGCGAGC GTCCGCTGCA TGCGCTCGCG TCGCGCGGCG TGCAGTACAT CGAAGTGCGC
TGCCTCGACA TCGATCCGTT CGAGCCGACC GGCATCGCGC TCGAGACCGC CCGCTTCATC
GATGCGTTCC TGCTCGCGTG CGCGCTCGAC GAGAGCCCCG TGCTCGACTG CGACGCGTAC
AAGGAAGCGA ATGCGAACTT CGCCAGCGTG ACGATGGACG GGCGCAAGCC GGGGCTCACG
CTGATGCGCG ACGGCCAGCC GGTCACGCTG CAGGCATGGG CGGACGACCT GATGGCCGAT
ATCGAAACCG TCGGGCGCCG CCTCGACGAG ATCCGCGGCG GCGACGAGCA TGCGCGTGCG
ATCGCCGCGC AGCGCGAGAA GCTTGCCGAT CCGGAGCGCA CGCCGTCGGC GCGCGTGCTG
CGCGAGATGC GCGAGAACGG GCAGTCGTTC CTCGCGTTCG CGCTCGCGCA CAGCGAAGCG
CATGCCGCGC ATTTCCGCGC GAACCCGCCG TCGGCGGAGA CGATGCGCGC CGAGCAGGCG
CTCGCGGCGA AGTCGCTGGC CGAGCAGGCC GAGCTGGAAG CGAAGGAGGC CGGATCATTC
GACGCGTTCG TCGCGGCCTA TCGTGCGTAC ACGCTGAACC GCTTCAGCGT TTGA
|
|---|
| Protein sequence | MSNTMTHRQS ELLLNRLEAL SSGPTRQHLP DGLRGIEKES LRVTRDGMIA FTPHPRALGS
ALTHPSLTTD YSEALIELIT PAEPDASLTL ERLDDLHRYV YASLGDEMLW NESMPGLLPA
DDEIPIADYG TSNIGRLKAV YRRGLAHRYG RTMQCIAGIH YNYSLHEEVW RRLHADEGST
ATLVDYQSER YLAQIRNFRR RSWLLMYLFG ASPALDTKFL RGKPHKLDAF DADTLYRPYA
TSLRMSDLGY SNTTAQAALH VDYNTLPGYL DALSKAVSEP YPPYEAIGTH RDGEWIQINT
NVLQIENEFY STIRPKRITY SGERPLHALA SRGVQYIEVR CLDIDPFEPT GIALETARFI
DAFLLACALD ESPVLDCDAY KEANANFASV TMDGRKPGLT LMRDGQPVTL QAWADDLMAD
IETVGRRLDE IRGGDEHARA IAAQREKLAD PERTPSARVL REMRENGQSF LAFALAHSEA
HAAHFRANPP SAETMRAEQA LAAKSLAEQA ELEAKEAGSF DAFVAAYRAY TLNRFSV
|
|---|
| |