| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3084 |
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| Symbol | |
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| ID | 6178010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 3425363 |
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| End bp | 3426280 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641682861 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001809775 |
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| Protein GI | 172062123 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR03339] aminoethylphosphonate catabolism associated LysR family transcriptional regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.115544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0198492 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCGATC AGCTGAAGGC GTTCCACGCG ACCGTCAGGC AGGGCAGCAT CACGCGCGCC
GCGCGCCATC TGGGCGTGAG CCAGCCGACG ATCGCCGCGC AGATCCGGCA GGTCGAGCAG
TGGTACGGCG TCGAGCTGTT CTACCGCAGC GGCCGCAAGC TCGAGGTCAC CGAGACCGGC
ATCGAGCTGC TGCCGCTCGT CGAGAAGATG ATCGCGCTCG AGGCGCAGGC CGACATCATG
CTGCGCAACG TCGGCGGCCT GTTCGAAGGC CATCTGCGGA TCGGCGCGAC GGGGCCGTAC
TACATCATGG ACGCGGTCGG CCGCTTCTCG CATGCGCATC CGTCGATCGC GCTCACGTGC
CGGATCGGCA ATTCCGAGGA GATCCTGCAG GCGCTGCAGG AATTTCGCAT CGATCTCGCG
GTGTCATCGC AGCGCAATGA CGCGGACGGC CTCGAACGCA AGGTGATCTC CACCGATCCG
CTCGTGCTCG TCGTGCATCG CGATCACCCG CTCGCGCGCT TCGACGCGAT CGACGCCGCG
CAGCTCGCCG ACGTGCGGCT GCTGATCCGC GAGGAAGGGT CGGTCACGCG CCGCTGCACG
GAGACGATCC TCGCGGCGGC CGGCGTCGCG GCCACGTCGG TCGCCGAGAT CGGCAGCCGT
GAAGCGATCC GCGAGGCGAT CCTGCATGGC GTGGGCGGGA GCCTGTTTCC ACGCGGCGAG
GCCGAGCGCC ATCCGGACCT GCGCGTCGTC GCGCTGCGAG GCGTCGACAC AACGATCGAC
GAATACGTGT ACTACCTGAA GGCGCGCCGC CAGAGCCCCG CGATCGATGC GTTCCTCGCG
TGCATCCTGC GTGCGCAGCC GGCCACGCAC GACGCGGCAA GCGCGGCACG CACGGCGCGG
CCGGTGAACG CACGCTGA
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| Protein sequence | MFDQLKAFHA TVRQGSITRA ARHLGVSQPT IAAQIRQVEQ WYGVELFYRS GRKLEVTETG
IELLPLVEKM IALEAQADIM LRNVGGLFEG HLRIGATGPY YIMDAVGRFS HAHPSIALTC
RIGNSEEILQ ALQEFRIDLA VSSQRNDADG LERKVISTDP LVLVVHRDHP LARFDAIDAA
QLADVRLLIR EEGSVTRRCT ETILAAAGVA ATSVAEIGSR EAIREAILHG VGGSLFPRGE
AERHPDLRVV ALRGVDTTID EYVYYLKARR QSPAIDAFLA CILRAQPATH DAASAARTAR
PVNAR
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