| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3083 |
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| Symbol | |
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| ID | 6178012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 3422963 |
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| End bp | 3425134 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641682860 |
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| Product | phospholipase C, phosphocholine-specific |
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| Protein accession | YP_001809774 |
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| Protein GI | 172062122 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3511] Phospholipase C |
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| TIGRFAM ID | [TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0309151 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCCA ACAATCGACG CGATTTCCTG CGCCTCGCCG CCCAGTCGGC CGGCGCGATG
GCCGCCTACG CCGGCTTCCC GCCCGCGATC CGCAAGGCGC TGGCCATGCC GGCCGCGTAT
CGCACCGGCA CGATTCGCGA CGTCGAACAC GTCGTGATCT TCATGCAGGA AAACCGCTCG
TTCGACCACT ACTTCGGCGG GCTGCGCGGC GTGCGCGGCT TCAACGACCC GCGTCCGCAC
CTGCTGCCGA GCGGTGCGCC GGTGTGGCAG CAGCCGCCGG CGTCGGTGTT CACGAAGAAC
TACCATTCGC GCGGGCTCGA CCCGGCCGCG CCGTACGTGC TGCCGTTCTA CCTCGACCCG
AAGCAGACGA CCGAATTCCA GCCGGGCACC AACCACGGCT GGAGCAGCGG CCACCTGTCC
TGGAACAACG GCCAGTGGGA CCAGTGGGTG AACCAGAAGC AGGACGTGCT GACGATGGGC
TACCTGAAGC GTCAGGACCT CACGTATCAC TACGCGCTCG CCGACGCGTT CACGATCTGC
GACTCGTACT TCTGCTCCGC GCACGCGGAC ACCGCGCCGA ACCGCATCTA CCTGTGGACC
GGCACGGTCG ACCCGCGCAA CATCTACGGC AGCTCGCCGA ACGGCCCGGG CATCGGCGAG
CGCAACGACG TGAACGGCTA CACGTGGACG ACCTACGCCG AGCGGCTCGA GGACGCGAAG
ATCAGCTGGA AGGTGTACCA GGGCGGCACC GGCATTCCGG GCGATCCGAC CGACAACTAC
ACCGACAATT CGCTGATGTT CTTCAAGCGC TTCCAGGTGA AGGAAGGTGC GAGCGGCGCG
CTGGTCGACA AGGGCGCGTC GGACCACACG CTCGCCGAAC TGAAGGCGGA CGTGCAGGCG
AACCGGCTGC CGCAGGTATC GTGGATCGTG TCGCCGTACA AGTACAGCGA GCACCCGCAG
GCGTCACCGA CCGACGGCGC GTTCTACATC AACATGGTGC TCGAGGCGCT CACGTCGGAC
CCCGAGGTGT GGGCGAAGAC GGTGCTCATC CTCAACTACG ACGAGAACGA CGGGCTGTTC
GACCACGTCG TGCCGCCGGT GCCTCCCGTT ACGAGCGGCG TGGGCGGCCA GGGCATCGTG
TCGTCGAACC TGCTGTCCAC CCTCGGCGAC GAACTGCTCG ACCTGAACAA GTACCCGGGC
GAGATGAGCC CGCTGGTGCC GGGCGCGGAC CCGGGCGGCA TCCAGCCGAT CGGCCTCGGG
CCGCGCGTGC CGCTGATCAT CATCTCGCCG TGGACGAAGG GCGGCTGGGT CTGCTCGGAG
ACGTTCGACC ACACGTCGGT GCTGCGTTTC CTCGAAGCGC GCTTCGGCGT GAAGGAGCCG
AACATCAGCG CGTGGCGCCG GTCGGTCTGC GGCGACCTCA CGTCGGCGTT CGATTTCTCC
GCGCGCCCCG ATACGCGCAC GGTGAGCTTC ACGGTGCCGC AGCACATCGC CACCGCCGGC
CACGCGTATC AAGTGCCCGC GCAGCAGTCG ATGCCGGCGC AGGAGCCCGG CACGCGTCCG
GCGCGCGCGC TGCCGTACGA ACTGTTCGTG CATGCGCGCG TGAACGGCCG CGACGACAGC
GTGTCGCTCG ATTTCGCGAA CTCGGGTGAC GCGGGCGCCG CATTCTACGT GTACGACCGC
CGCAATCCGG CGACGCCGCC GCGCCGCTAC GCGGTGTCGT CGCACGACCG CTTCGCCGAT
ACCTGGAGCA CGTCGGCCGC GCGCGGCGAC TACCATCTCG CCGCGTATGG CCCGAACGGC
TATCTGTGCG AGTTCCAGGG CAACACGCGG CTGGCCGCGG ACGGCAGCCA CGCGAACCCG
GAAGCGAAGA TCGGCTACGA CGTGCGCAAC CGGCACGTGT ACCTGCAGTT GCGCAACAGC
GGCCGCGCGG CGTGCCGGGT GGTCGTCGAC AACGCGTACA GCCATGCGCA TGCGCGCACG
TACACGCTGG AGCCGGGCGC GCGCATCGAG GATCATTTCG AGCTGTCGTC GAGCCACGGC
TGGTACGATC TGACGATCAC CGCGACGACG TTGCGCGGCG GCGACGACAA GGTCGTGCGC
CGCTTCGCGG GCCACGTCGA GACGGGCCGG CCGAGCCAGA GCGACCCGGG ACCGGTGAAG
CAGACGGTCT GA
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| Protein sequence | MSANNRRDFL RLAAQSAGAM AAYAGFPPAI RKALAMPAAY RTGTIRDVEH VVIFMQENRS
FDHYFGGLRG VRGFNDPRPH LLPSGAPVWQ QPPASVFTKN YHSRGLDPAA PYVLPFYLDP
KQTTEFQPGT NHGWSSGHLS WNNGQWDQWV NQKQDVLTMG YLKRQDLTYH YALADAFTIC
DSYFCSAHAD TAPNRIYLWT GTVDPRNIYG SSPNGPGIGE RNDVNGYTWT TYAERLEDAK
ISWKVYQGGT GIPGDPTDNY TDNSLMFFKR FQVKEGASGA LVDKGASDHT LAELKADVQA
NRLPQVSWIV SPYKYSEHPQ ASPTDGAFYI NMVLEALTSD PEVWAKTVLI LNYDENDGLF
DHVVPPVPPV TSGVGGQGIV SSNLLSTLGD ELLDLNKYPG EMSPLVPGAD PGGIQPIGLG
PRVPLIIISP WTKGGWVCSE TFDHTSVLRF LEARFGVKEP NISAWRRSVC GDLTSAFDFS
ARPDTRTVSF TVPQHIATAG HAYQVPAQQS MPAQEPGTRP ARALPYELFV HARVNGRDDS
VSLDFANSGD AGAAFYVYDR RNPATPPRRY AVSSHDRFAD TWSTSAARGD YHLAAYGPNG
YLCEFQGNTR LAADGSHANP EAKIGYDVRN RHVYLQLRNS GRAACRVVVD NAYSHAHART
YTLEPGARIE DHFELSSSHG WYDLTITATT LRGGDDKVVR RFAGHVETGR PSQSDPGPVK
QTV
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