Gene BamMC406_3082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3082 
Symbol 
ID6178024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp3422076 
End bp3422801 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content69% 
IMG OID641682859 
ProductGntR family transcriptional regulator 
Protein accessionYP_001809773 
Protein GI172062121 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID[TIGR03338] phosphonate utilization associated transcriptional regulator 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0349212 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCC CGACCGCACT CAACGCCATC GAACTCCTGC AGAGCCAGTC GCTCGCAATG 
ATCGTGCAGG ACATGCTCGA GCGTGCGATC GTGTCCGGCG AATACGCACC GGGCGAGAAG
CTCAACGAAG TCGATATCGC GACCAGGCTG AACGTGTCGC GCGGCCCCGT GCGCGAAGCG
TTCCGCGCGC TCGAGCAGGC CGGGCTGCTG CGCAACGAGA AGAACCGCGG CGTGACGGTG
CGGGTCGTGC CGCTGCGCGA GGCCGAGGAA ATCTACGAAG TGCGCGCGAT GCTCGACGAG
TCGGTCGCGC GTGCGCTCGC GAAGCGCATT TCGCCCGACA CGCTGAAGGT GCTGAAGGGC
ATCATCCAGT CGATGAAGCA AGCCGCGAAG GCGCACGACG TCACGCGCTA CACCGAGCTG
AACGTGCAGT TCCACGACGC GATGGTGGTC GGCGTCGGCA ATACGCACCT CATCGATACC
TATCGCCGGC TCGTGCGCCA GCTCGGGCTG CTGCGCCAGG CCGCGATCGA GGCGGAAGAG
GATGCCATCG CGGTGTCCGC GGCCGAGCAC GACAAGATCG TGCAGGCGCT CGCGAGCGGC
GACGAGGAGA AGGCGGTCGC GCTCGTGCGC GAGCACGTCG CACACGGCCT CGCGCGGATG
CGCCGCACGC ACGAGCAGGG GCTGCCGGCG ACGGGGAAGG CGGCGCGGGA GAAGGCGGGC
GCGTGA
 
Protein sequence
MTAPTALNAI ELLQSQSLAM IVQDMLERAI VSGEYAPGEK LNEVDIATRL NVSRGPVREA 
FRALEQAGLL RNEKNRGVTV RVVPLREAEE IYEVRAMLDE SVARALAKRI SPDTLKVLKG
IIQSMKQAAK AHDVTRYTEL NVQFHDAMVV GVGNTHLIDT YRRLVRQLGL LRQAAIEAEE
DAIAVSAAEH DKIVQALASG DEEKAVALVR EHVAHGLARM RRTHEQGLPA TGKAAREKAG
A