| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3071 |
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| Symbol | |
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| ID | 6178134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 3411706 |
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| End bp | 3412572 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641682848 |
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| Product | patatin |
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| Protein accession | YP_001809763 |
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| Protein GI | 172062111 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.624704 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGACC AGATCGTCTT CGCGGGAGGC GGCAATCGCT GCTGGTGGCA GGCCGGCTTC
TGGGATGTCG CGCAGCCGGC GCTCGGTTTG CGCCCGCGCG TGATCGCCGG CATCTCGGCC
GGCGCGGCGA CCGCCTGCAT GTTGTATACG CGCGACGCCG CGTGGGTGAT GCGCTATTAC
GAGGAAGCAC TGCGCCACAA CCGCAAGAAC GCGTACTGGG GCAACCTGTT CGGGCGCGAG
CCCGTGTTTC CGCATTACCG GATCTACCGC CAGGCGCTGC TCGACATCTA CGGCGAGCCG
TTCGCGCAAC TCGCCGACGC GCCGGAAATC CGCGTCGGCG TGTCGCACGT GCCGCGCTGG
CTCGGCGCGC GCAGCGCGGT CGCCGCGGGC CTCGTCGCGT ACAACATCGA AAAGTACGTG
CGCAAGACGC TGCATCCGAC GCTCGGGCGC ACGCTCGGTT TCCGGCCCGA GTTCGTGCGC
GCGCAGGCCT GCACGAGCGT CGACGAACTC GCCGACCTGA TCCTGCAGTC GTCGTGCACG
CCGCCGTTCA CGCCGGTGCT GCGTCGCGGC GGCCGGCCGG TGCTCGATGG CGGCATGGTC
GACAACGTGC CGGTCGGCGC GCTCGACCCG TCGCCGGGCG ACGTGCTGGT GCTCGTCACG
CGGCTGTATC CGCGCCCGCA GATGTTTACG GTCGCGCACG GCGAGCAGCG GCGGCTCTAT
GTACAGCCGT CGAGCAAGGT GCCGATTTCG AGCTGGGATT ACACGAGTCC GTCGCAGATG
CGGCATGCGT ACGATCTCGG GCGGCGCGAC GGCGAGCATT TCCTCACGCG CGTCGACGCG
ATGACAGGCG GCCGCGTGGC TGCCTGA
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| Protein sequence | MFDQIVFAGG GNRCWWQAGF WDVAQPALGL RPRVIAGISA GAATACMLYT RDAAWVMRYY
EEALRHNRKN AYWGNLFGRE PVFPHYRIYR QALLDIYGEP FAQLADAPEI RVGVSHVPRW
LGARSAVAAG LVAYNIEKYV RKTLHPTLGR TLGFRPEFVR AQACTSVDEL ADLILQSSCT
PPFTPVLRRG GRPVLDGGMV DNVPVGALDP SPGDVLVLVT RLYPRPQMFT VAHGEQRRLY
VQPSSKVPIS SWDYTSPSQM RHAYDLGRRD GEHFLTRVDA MTGGRVAA
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