| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3070 |
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| Symbol | |
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| ID | 6178136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 3410644 |
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| End bp | 3411657 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641682847 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001809762 |
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| Protein GI | 172062110 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.858614 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTG CCATTCTCGA CGACTACCAG GACGCCGTCC GCAAGCTGAA CTGCTTCGAG
ATGCTCGCCG AGCACGACGT GAAGGTCTTC AACAACACGG TGCGCGGCTT GGGGCAGCTC
GCGAGCCGTC TCGCGGAAGT CGAGGCGCTC GTGCTGATTC GCGAGCGCAC GCCGATTTCG
TCGCAACTGC TCGCCAAGCT GCCGAACCTG CGCATGATCA GCCAGACCGG CCGTATCTCG
ACCCACATCG ACCTCGAAGC GTGTACCGAC CGCGGCATCG CGGTGCTCGA GGGCACGGGT
TCGCCGGTCG CGCCGGCCGA ACTGACCTGG GCACTCGTGA TGGCCGCCCA GCGCCGCATT
CCGCAATACG TCGCGAACCT GAAGCAGGGT GCGTGGCAGC AGTCGGGCCT GAAGACGTCG
GCCATGCCGC CGAACTTCGG CCTGGGCCAG GTGCTGCGCG GCCAGACGCT CGGCATCTGG
GGCTATGGCA AGATCGGCCG GCTGGTCGCC GGCTATGGCA AGGCGTTCGG AATGAACGTG
CTGATCTGGG GCCGCGAGCA TTCACTCGAG GCCGCGCGCG CCGACGGCTA CACGGCCGCC
GAAAGCCGCG AAGCGCTGTT CGAGCAGAGC GACGTGCTGT CGCTGCACTT GCGCATGCAC
GACGACACGC GCGGGATCGT CAAGCAGGAA GACCTGATGC GGATGAAGCC GACGTCGCTG
CTCGTCAACA CGAGCCGCGC GGAGCTGCTC GAGGAAAACG CGCTCGTGAA CGCGCTGTCG
CACAACCGTC CGGGGATGGT CGCGATCGAC GTGTTCGAAA GCGAGCCGAT CCTGCAAGGC
TACAGCCTGC TGCGGATGGA AAACGTGATC TGCACGCCGC ATATCGGCTA CGTCGAACGC
GAAAGCTACG AGCTCTATTT CAGCGCGGCG TTCCGGAACA TCCTCGCGTT CGATCAGGGC
GACATGTCGA GCGTGGTCAA CCCGGAAGCG CTGACGCCGC GCCGCGTGCG CTGA
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| Protein sequence | MKIAILDDYQ DAVRKLNCFE MLAEHDVKVF NNTVRGLGQL ASRLAEVEAL VLIRERTPIS
SQLLAKLPNL RMISQTGRIS THIDLEACTD RGIAVLEGTG SPVAPAELTW ALVMAAQRRI
PQYVANLKQG AWQQSGLKTS AMPPNFGLGQ VLRGQTLGIW GYGKIGRLVA GYGKAFGMNV
LIWGREHSLE AARADGYTAA ESREALFEQS DVLSLHLRMH DDTRGIVKQE DLMRMKPTSL
LVNTSRAELL EENALVNALS HNRPGMVAID VFESEPILQG YSLLRMENVI CTPHIGYVER
ESYELYFSAA FRNILAFDQG DMSSVVNPEA LTPRRVR
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