| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3068 |
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| Symbol | |
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| ID | 6178157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 3406432 |
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| End bp | 3409029 |
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| Gene Length | 2598 bp |
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| Protein Length | 865 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641682845 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_001809760 |
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| Protein GI | 172062108 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAAG CTCTGATCAT TGCGGAAAAG CCTTCTGTCG CGAACGACAT CGCGCGCGCT
TTGGGCGGCT TTACCAAGCA TGACGAATAC TTCGAAAGCG ACGAATTCGT CCTTTCGTCC
GCGGTCGGCC ACCTGCTGGA AATCGCCGCC CCGGAAGAGT ACGAGGTCAA GCGCGGCAAA
TGGAGCTTCG CTCATCTGCC CGTCATCCCC CCGCATTTCG ACCTCAATCC GATCGCAAAA
AGCGAATCGC GCCTGAAGGT CCTTACCAAG CTGATGAAGC GCAAGGACGT CGACCGCCTG
ATCAACGCAT GTGACGCGGG GCGCGAGGGC GAACTGATTT TCCGCCTGAT CGTGCAGCAT
GCGAAGGCGA AGCAGCCGGT CCAGCGCCTG TGGCTGCAGT CGATGACGCC GCAGGCGATT
CGCGACGGTT TCGCGCACCT GCGCAGCGAC ACCGACATGC AGCCGCTCGC CGACGCCGCC
CGCTGCCGTT CCGAAGCCGA CTGGCTCGTC GGGATCAACG GCACCCGCGC GATGACTGCG
TTCAACAGCA AGGGTGGCGG CTTCTTCCTG ACGACCGTCG GTCGCGTTCA GACGCCAACG
CTGTCGATCG TCGTCGAACG TGAAGAGAAA ATCCGCCGCT TCGTCCCGCG CGACTACTGG
GAAGTGAAGG CCGCGTTCGC ATGCGCGAGC GGCTTCTACG AAGGCAAGTG GTACGACCCG
AAATTCAAGC GGGACGAGTT CGATCCGGAA AGGCGCGATT CCCGCCTGTG GAGCCTGCCG
GCCGCCGAAA CCATCGTCGC CGCATGCCGC GACCAGGTCG GCACGGTATC CGAGGAATCG
AAGCCGTCGA CCCAGCTGTC GCCGCTGCTG TTCGACCTGA CGAGCCTGCA GCGCGAGGCG
AACAGCCGCT TCGGCTTCTC CGCGAAGAAC ACGCTCGGCC TCGCGCAGGC GCTGTATGAA
AAGCACAAGG TGCTGACGTA CCCGCGTACC GACGCGCGCG CACTGCCGGA AGACTACATT
TCGACGGTGC AGTCCACGCT CGAGATGCTC AAGGAGAGTC ACAACTACCT GCCGCATGCG
AAGCGGGTGC TCGACCAGGG CTGGGTGAAG CCGAACAAGC GCATCTTCGA CAACTCGAAG
ATCAGCGACC ACTTCGCCAT CATCCCGACG CTGCAGGCGC CGAAGTCGCT GTCCGAGCCG
GAGCAGAAGC TGTACGACAT GGTCGTGAAG CGCTTCCTCG CGGTGTTCTT CCCGGCGGCC
GAATTCCGTG TCACGACGCG GATCACCGAA GTCGCCGGCC ATCACTTCAA GACCGAAGGC
AAGGTGCTCG TCGAGCCGGG CTGGCTGCAG GTGTATGGCC GCGACGCCGA AGGCGCGGAC
GCGAACCTCG TGCCGGTGCA GAAGGACGAG AAGGTGAAGA CGGACGAGAT CGCCGCCGTC
GCGCTCGTCA CCAAGCCACC CGCACGCTAC TCGGAAGCGA CGCTGCTGTC CGCGATGGAA
GGCGCCGGCA AGCTCGTGGA GGACGACGAG CTGCGCGAGG CGATGGCCGC GAAGGGCCTC
GGCACGCCGG CCACGCGCGC GGCGATCATC GAAGGCTTGT TGGGTGAGAA GTATCTCGTG
CGCGAAGGCC GCGAGCTGAT CCCGACCGCG AAGGCATTCC AGCTGATGAC GCTGTTGCGC
GGGCTCGGTG TGAAGGAACT GACCGCGCCC GAACTGACCG GCGAATGGGA ATACAAGCTG
TCGCAGATGG AGCGCGGTAA CCTCGGGCGC GACGCGTTCA TGCAGGAAAT CGCCCGCATG
ACGCAGCAGA TCGTCAAGCG CGCGAAGGAA TACGATTCCG ACACGATCCC CGGCGATTAC
GCGACGCTCG AGACGCCGTG CCCGAACTGC GGCGGCCAGG TGAAGGAAAA CTACCGCCGC
TTCGCGTGCA CGAAGTGCGA GTTCTCGATC TCGAAGATTC CGGGCAGCCG GCAGTTCGAG
ATCGCGGAAG TCGAGGAACT GCTGCAGCAG AAGACCATCG GTCCGCTGTC CGGTTTCCGC
AGCAAGATGG GCCGTCCGTT CTCGGCGATC CTGAAGCTGT CGTTCGACGA CGAAACGAAG
AACTACAAGC TCGAGTTCGA CTTCGGCCAG GACCAGGGCG GCGAGGAAGG CGAGGCGCCC
GACTTCTCCG AGCAGGAACC GGTCGGCGCG TGCCCGAAAT GCAACGGCCG CGTGTTCGAG
CACGGGATGA GCTATGTGTG CGAGCACTCG GTCGCGAATC CGAAGACCTG CGACTTCCGT
TCGGGCAAGG TGATCCTGCA GCAGGAAATC ACGCGCGATC AGATGGCCAA GCTGCTCGCC
GACGGTAGAA CGGATCTGAT GCCGAACTTC AAGTCGTCGC GCACGGGCCG CAACTTCAAG
GCGTTCCTCG TGAAGCAGCC GGACGGCAAG ATCGGTTTCG AGTTCGAAAA GAAGGAGCCG
AAGGCGGCTG CCGCGAAGAA GACGGCGAAA TCGGCGACGA AGGATGCCGA AACCGTGACG
GAAGGCGCCG ACGAGAAACC GGCCCCCGCC CGCAAGACCG CCACCCGCAA GACCACGGCG
CGCAAGACGG GCTCGTAA
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| Protein sequence | MSKALIIAEK PSVANDIARA LGGFTKHDEY FESDEFVLSS AVGHLLEIAA PEEYEVKRGK
WSFAHLPVIP PHFDLNPIAK SESRLKVLTK LMKRKDVDRL INACDAGREG ELIFRLIVQH
AKAKQPVQRL WLQSMTPQAI RDGFAHLRSD TDMQPLADAA RCRSEADWLV GINGTRAMTA
FNSKGGGFFL TTVGRVQTPT LSIVVEREEK IRRFVPRDYW EVKAAFACAS GFYEGKWYDP
KFKRDEFDPE RRDSRLWSLP AAETIVAACR DQVGTVSEES KPSTQLSPLL FDLTSLQREA
NSRFGFSAKN TLGLAQALYE KHKVLTYPRT DARALPEDYI STVQSTLEML KESHNYLPHA
KRVLDQGWVK PNKRIFDNSK ISDHFAIIPT LQAPKSLSEP EQKLYDMVVK RFLAVFFPAA
EFRVTTRITE VAGHHFKTEG KVLVEPGWLQ VYGRDAEGAD ANLVPVQKDE KVKTDEIAAV
ALVTKPPARY SEATLLSAME GAGKLVEDDE LREAMAAKGL GTPATRAAII EGLLGEKYLV
REGRELIPTA KAFQLMTLLR GLGVKELTAP ELTGEWEYKL SQMERGNLGR DAFMQEIARM
TQQIVKRAKE YDSDTIPGDY ATLETPCPNC GGQVKENYRR FACTKCEFSI SKIPGSRQFE
IAEVEELLQQ KTIGPLSGFR SKMGRPFSAI LKLSFDDETK NYKLEFDFGQ DQGGEEGEAP
DFSEQEPVGA CPKCNGRVFE HGMSYVCEHS VANPKTCDFR SGKVILQQEI TRDQMAKLLA
DGRTDLMPNF KSSRTGRNFK AFLVKQPDGK IGFEFEKKEP KAAAAKKTAK SATKDAETVT
EGADEKPAPA RKTATRKTTA RKTGS
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