| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3065 |
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| Symbol | def |
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| ID | 6178171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 3403820 |
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| End bp | 3404323 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641682842 |
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| Product | peptide deformylase |
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| Protein accession | YP_001809757 |
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| Protein GI | 172062105 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.566479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTGC TGAACATTCT TCATTACCCC GACAAGCGGC TGCACAAGGT CGCCAAGCCC
GTCGCCAAGG TCGACGACCG GATTCGCAAG CTTGTCGCCG ACATGGCCGA AACCATGTAC
GCGGCGCCGG GCATCGGCCT CGCGGCGACG CAGGTCGACG TGCACGAGCG CGTGATCGTG
ATCGACATCT CCGAGGAGAA GAACGAGCTG CGCGCGTTCA TCAATCCCGA GATCATCTGG
TCGAGCGACG AGAAGCAAAT CTACGAGGAG GGTTGCCTGT CGGTGCCCGG GATCTACGAC
GAGGTCGAGC GCCCGGACCA CGTGCGCGTG CGTGCGCTCA ACGAGCAGGG CGAGACCTTC
GAGCTCGACT GCGAGGGCCT GCTGGCCGTG TGCGTGCAGC ACGAGATGGA TCACCTGATG
GGACGCGTGT TCGTCGAATA CCTGTCGCCG CTGAAGCAGA CGCGCATCAA GACGAAGATG
AAGAAACTCG AACGCGCGAT GTGA
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| Protein sequence | MALLNILHYP DKRLHKVAKP VAKVDDRIRK LVADMAETMY AAPGIGLAAT QVDVHERVIV
IDISEEKNEL RAFINPEIIW SSDEKQIYEE GCLSVPGIYD EVERPDHVRV RALNEQGETF
ELDCEGLLAV CVQHEMDHLM GRVFVEYLSP LKQTRIKTKM KKLERAM
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