| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3061 |
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| Symbol | |
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| ID | 6178182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 3399530 |
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| End bp | 3400918 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641682838 |
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| Product | sun protein |
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| Protein accession | YP_001809753 |
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| Protein GI | 172062101 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGAA CCCGTTCCTC CGCTCCGTCT TCCTCCGGCC GCCCCGCGCG CCTGTCCGCG
CTGCGTCTCG CGCCCGATTC GCTCGGCTTC GCGCTCGACG CGGCCGCGCA GGCAGTCGAT
GCGGTGCGGC GCGGTACCGC GCTGCCGGCG GCACTGGCCG CGGTGTTCGC GCAGATGCCG
GCCGATGCGC AGGCGCTGGC GCGCGGCGCG ACGCAGGACG TCGCCTACCG GACGATGCGG
CGCCTCGGCA GCGCGGACTG GCTGATCGGC CGGCTCGTTG GCAAGGCGCC GCCCGCGCAC
GTGCAGGCGG TACTCGCCGC CGCGCTTGCG CTGCTGCTCG ATCCGGAGGA GACGGCCGCG
TATCCGGCGT TTACGATCGT CGACCAGGCC GTCACCGTGA TCGGCGCGCG GCGCGAATTC
GCGTTCGCGA AGGGGCTGGT GAACGCGGTG CTGCGCCGTT TCCAGCGTGA ACGCGACGCG
CTCGTCGCGG CGCTGCAGGA CGATCCGGTC GCTCGCTGGA ACTACCGTCC GTGGTGGATC
GATGCGGTGA AGCGCGCATG GCCGGACACA TGGCAGGCGA TCCTCGCGGC CGGCGAGCGC
CAGGGGCCGC TGACGCTGCG CGTGAACGCG CGCCGCGCGA GCGTCGACGC GTATCTCGAC
ACGCTGCGCG CGAACGGGAT CGACGCGACC GCGATCGGCC GCCATGCGGT GCGGCTCGCA
TCGGCGCTGC CGGTCGATCG CATTCCGGGC TTCGCGGACG GCGTCGTGTC GGTGCAGGAT
GCCGGCGCGC AGCTCGCCGC CGAATGGCTC GGCGCGCGTG ACGGCATGCG CGTGCTCGAT
GCATGCGCGG CACCGGGCGG CAAGACCGGC CATATCCTCG AGCTGGCCGG CGCTGAGGTC
GTTGCGCTCG AAAGCGACGC GACCCGCGCG GCGCGCATCG GCGAGAACCT CGCGCGCCTG
TCGCTCGCGG CGGACGTGTG CGTCGGCGAT GCCGGCGCGC CGGATGCGTG GTACGACGGC
CGGCCGTTCG ATCGCATCCT CGCCGACGTG CCGTGCTCGG CGTCGGGCAT CGTGCGCCGT
CATCCGGACA TCCGCTGGCT GCGCCGCGAA GCCGACATCG CGGCACTCGT CGCGGAACAG
CGTCGCATCC TGACGGCGTT GTGGCCGCTC GTGAAGCCGG GCGGCGAACT GCTCTACGTG
ACCTGTTCGA TCTTCCCCGA GGAGGGCGAA TTGCAGGCCC GCTGGTTTGA AGCGGCCTGT
GAAGATGCGG TACGATTGGA CGCGCCCGGC CAACTGCTGC CGGGCGGCGT GCCCGCCGTA
GCGGCCGGCG CACTCGACCA GAACACCGAT CACGACGGAT TTTTCTACGC GCGGTTTCAG
AAACGGTGA
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| Protein sequence | MTRTRSSAPS SSGRPARLSA LRLAPDSLGF ALDAAAQAVD AVRRGTALPA ALAAVFAQMP
ADAQALARGA TQDVAYRTMR RLGSADWLIG RLVGKAPPAH VQAVLAAALA LLLDPEETAA
YPAFTIVDQA VTVIGARREF AFAKGLVNAV LRRFQRERDA LVAALQDDPV ARWNYRPWWI
DAVKRAWPDT WQAILAAGER QGPLTLRVNA RRASVDAYLD TLRANGIDAT AIGRHAVRLA
SALPVDRIPG FADGVVSVQD AGAQLAAEWL GARDGMRVLD ACAAPGGKTG HILELAGAEV
VALESDATRA ARIGENLARL SLAADVCVGD AGAPDAWYDG RPFDRILADV PCSASGIVRR
HPDIRWLRRE ADIAALVAEQ RRILTALWPL VKPGGELLYV TCSIFPEEGE LQARWFEAAC
EDAVRLDAPG QLLPGGVPAV AAGALDQNTD HDGFFYARFQ KR
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