| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3055 |
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| Symbol | |
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| ID | 6178301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 3393433 |
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| End bp | 3393885 |
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| Gene Length | 453 bp |
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| Protein Length | 150 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641682831 |
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| Product | queuosine biosynthesis protein QueD |
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| Protein accession | YP_001809747 |
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| Protein GI | 172062095 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0720] 6-pyruvoyl-tetrahydropterin synthase |
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| TIGRFAM ID | [TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.496722 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCTGATTA CCCGAAAACT CGAATTCGAC GCGGGCCACC GCATTCCCGA TCACCGCAGC
CAGTGCCGGA ACCTGCACGG CCATCGCTAC GTGCTCGAAG TCACGCTGCG CGGCGATCTC
GTCGATACCG AGGGGGCGCC GGACCGCGGC ATGGTGATGG ATTTCGCCGA CGTGAAGGCG
CTCGCGGTCG AGCACCTCGT CAACAAGTGG GATCACGCGT TCCTGGTCTA CGCGCGCGAC
GAGGTCGTGC GCTCGTTCCT CGAGCAGATG GCCGACCACA AGACGGTCGT GCTCGACCGG
ATCCCGACGG TCGAGAACCT CGCGGCGATC GCGTTCGACA TCCTCGCGAA CGTGTACGAC
GCGCACTACG GCGTGAACCT GCGGCTGGAG CGCGTGCGCC TGTACGAAAC GCCGAACTGC
TGGGCCGACG TCGAGCGCGA TCCCGCCCGC TGA
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| Protein sequence | MLITRKLEFD AGHRIPDHRS QCRNLHGHRY VLEVTLRGDL VDTEGAPDRG MVMDFADVKA
LAVEHLVNKW DHAFLVYARD EVVRSFLEQM ADHKTVVLDR IPTVENLAAI AFDILANVYD
AHYGVNLRLE RVRLYETPNC WADVERDPAR
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