Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3054 |
Symbol | |
ID | 6178324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 3392401 |
End bp | 3393186 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641682830 |
Product | 2-dehydro-3-deoxyglucarate aldolase |
Protein accession | YP_001809746 |
Protein GI | 172062094 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.761054 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGC TCACCAATTC CCTCAAACAA CGTCTGCACG ACGGCGACGA GCCGCTGTAC GGCCTGTGGC TGTCGCTCGG CTGCGATTCG GCGGCTGAAG CGCTCGCGCA CGCCGGCTAC GACTGGCTCT GCATCGACAT GGAGCACGCG CCGAACGACA GCCGGGACGT CGCGTCGCAA CTGCGCGCGC TGGCCGCCGC GCATCTGCCG AGCGAGCCCG TCGTGCGGGT GCCGGGGCGC GAGCCGTGGC TCGTGAAGCG CGCGCTCGAC GCCGGCGCGC GCACGCTGAT GTTCCCGTGC ATCGAGACGG CCGACGAGGC CGCGCACGCG GTGCGGCTCA CGCGCTTCCC GTCGCCGGAT GCCCCGGACG GGCTGCGCGG CGTGGCCGGC ATGGTGCGCG CGGCGGCGTT CGGCATGCGC CGCGATTACC TGCAGACGGC GAACGCCCAG ATTGCGGTGA TCGTGCAGAT CGAATCGGCG CGCGGCATCG ACGAAGTCGA ACGGATCGCC GCGACGCCGG GCGTCGACTG CCTGTATGTC GGCCCGGCCG ATCTGGCGGC GAGCCTCGGG CATCTCGGCG ACAGCCGCCA CCCGGATGTC GAGACCGCGA TGGCACGCGT GCTCGCGGCC GGCAAGCAGG CCGGCGTCGC GGTCGGCATC TTCGCGAGCG ATACGGCTAT CGCGCGCCAG TATCGCGAGG CCGGCTACCG GATGATCACG CTGTCGGCCG ACGTGACCTG GCTGCTGCGC GCGACGCGGC AGGCGCTGCA GGAGGTGCGG TCATGA
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Protein sequence | MSTLTNSLKQ RLHDGDEPLY GLWLSLGCDS AAEALAHAGY DWLCIDMEHA PNDSRDVASQ LRALAAAHLP SEPVVRVPGR EPWLVKRALD AGARTLMFPC IETADEAAHA VRLTRFPSPD APDGLRGVAG MVRAAAFGMR RDYLQTANAQ IAVIVQIESA RGIDEVERIA ATPGVDCLYV GPADLAASLG HLGDSRHPDV ETAMARVLAA GKQAGVAVGI FASDTAIARQ YREAGYRMIT LSADVTWLLR ATRQALQEVR S
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