| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3053 |
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| Symbol | |
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| ID | 6178412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 3391628 |
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| End bp | 3392404 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641682829 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_001809745 |
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| Protein GI | 172062093 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.417858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACG ACGACGGCGC GGGGACGAGA CGCGCGCGGC GCACGACCGG TGTACGTGGG
CGGATCGGCG CGATGCTCGG GCTGTGGGTC GTGAGCATCG CGGCGTCGGC GCAGAATGCG
CCGCACGCGA AACCGGATCC GGCACACGAG ACGCAAGCGG CGGTGGCCGC CTACAACGCC
GGCGACTATC GCGCGGCGCT GGTGCAGTTC CACGACGCAG CCGAACGCGG CGACCGGCTC
GCGCAGTTCA ACTACGCGAT GATGCTGCTC ACCGGCGTCG GCGTGACCGC GAAGGTCGAC
GAAGGGCTGC GCTGGCTGAA GCGGGCGGCC GACGCGAACA TGTCTCATGC GCAGTACGTG
TACGGACGGA TGTTCGACGA CGGCGAATTC GTCGCGCGCA ATCCGGCCGA AGCGCACCGC
TGGTTCCTGC GCGCGGCGAA GCAGGGGCAC GTGCAGGCCG CCCTGTCGCT CGCGAACCAG
TTCCTCGACG GGCGCGGCAC GCCGCGCGAC AACCGGCAGG CGTTCGCGTG GTACAAGCAG
GCGGCCGACG CGGGCGAGCC GACCGCGCAG TACGTGACCG CGTCGTTCTA CGAGCGCGGC
GGCGACGGCG TCACGCAGAA CCTGAACATC GCGCGCGCGT ACTATGCGGC CGCGGCCGCG
CAGGGCGACG AGACGGCCGA GCTGAAATTC AAGGAACTGA GCGCGCGACT GAAGACGCAG
GAGCCGGCAT CGGGCGCCGG TGCGGACCAC GCGAGCCCAC GCGCGACGCC GCAGTGA
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| Protein sequence | MNDDDGAGTR RARRTTGVRG RIGAMLGLWV VSIAASAQNA PHAKPDPAHE TQAAVAAYNA
GDYRAALVQF HDAAERGDRL AQFNYAMMLL TGVGVTAKVD EGLRWLKRAA DANMSHAQYV
YGRMFDDGEF VARNPAEAHR WFLRAAKQGH VQAALSLANQ FLDGRGTPRD NRQAFAWYKQ
AADAGEPTAQ YVTASFYERG GDGVTQNLNI ARAYYAAAAA QGDETAELKF KELSARLKTQ
EPASGAGADH ASPRATPQ
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