Gene BamMC406_3049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3049 
Symbol 
ID6178571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp3386393 
End bp3387463 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content71% 
IMG OID641682825 
Productrod shape-determining protein MreC 
Protein accessionYP_001809741 
Protein GI172062089 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATACA GTCCGCCGCC CCTCTTCAAG CAAGGTCCGC CCGCGCTCGC GCGGCTCATC 
TTCTTCGTCG CCCTCGCCAT CGCGCTCCTC GTGTCGGACG CGCGCTTCAG CACGCTCGAA
ATCGTCCGCG GCGTGCTCGG CACCGTGCTG TACCCGCTGC AGCGCGCGGC GCTCGTGCCG
CGCGACCTGT TCATGGGCGC GGCCGACATC GCCGTCACGG GTGCATCGCT GCGCCACGAC
AACGACGCGC TGCGCAAGCG CAACCTGCAA CTGTCCACGC AGGCCAACCA GGCCGCCGTG
CTCGCGCAGG AAAACATGCA TCTGCGCGCG GTGCTCGAAC TGCGCCAGCA CATCGCGACG
CAGTCGACCC CGGTCGAGAT CCAGTACGAC ACGAGCGACC CGTTCACGCA GAAGATCGTG
ATCGGCCAGG GTTCGCAGCA AGGCATCCAG GACGGCTCGC CGGTCGTCAG CGAGGACGGC
GTGGTCGGCC AGGTCACGCG CGTGTTCCCG CTGCAGGCCG AAGTCACGCT GATCACCGAC
CGCGATCTCG CGATTCCCGT GCAGGTGCTG CGCACCGGCC TGCGCAGCGT GATCTACGGC
ACGCCGAAGG GCGATTCGCT CGATCTGCGC TTCGTGCCGA CGAGCTCGGA CCTCGTCGCG
GGCGACGAGC TCGTCACGAG CGGCCTCGAC GGCGTCTATC CGCCGGGCCT GCCGGTCGCG
AAGGTCGTGC ACGTCGACAA GCTCGCCGAT ACCGCGTTCG CCCGCGTGAC CTGCGCACCG
GTCGCCGCCG TGCGCGGCGC GCGCCAGATG CTCGTGCTGC ATTACCAGAA CGACGTCCCG
CCGCGTCCGG CGGAGCCGGA GCCGGCCGCC GACAAGAAGG GAAAGAAAGG CGCGAAGGCC
GCCGCGAAGG GCGAGAAAGC GGAGAAGGCC GAGAAGGCCG ACGCGAACGC GAAGCCGTCC
GCTGCGGCCG CACCCGGCGC GAAACCCGCG CCGGCGGCGC CCGCCGCGCC GGCCCAGCCC
GCTGCCGCGC CCGCGAAGCC CGCGGCCGGG CAACCAGGAG CCCCGCGATG A
 
Protein sequence
MEYSPPPLFK QGPPALARLI FFVALAIALL VSDARFSTLE IVRGVLGTVL YPLQRAALVP 
RDLFMGAADI AVTGASLRHD NDALRKRNLQ LSTQANQAAV LAQENMHLRA VLELRQHIAT
QSTPVEIQYD TSDPFTQKIV IGQGSQQGIQ DGSPVVSEDG VVGQVTRVFP LQAEVTLITD
RDLAIPVQVL RTGLRSVIYG TPKGDSLDLR FVPTSSDLVA GDELVTSGLD GVYPPGLPVA
KVVHVDKLAD TAFARVTCAP VAAVRGARQM LVLHYQNDVP PRPAEPEPAA DKKGKKGAKA
AAKGEKAEKA EKADANAKPS AAAAPGAKPA PAAPAAPAQP AAAPAKPAAG QPGAPR