Gene BamMC406_3042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3042 
Symbol 
ID6178652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp3378555 
End bp3379607 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content66% 
IMG OID641682818 
Productalcohol dehydrogenase 
Protein accessionYP_001809734 
Protein GI172062082 
COG category[R] General function prediction only 
COG ID[COG1064] Zn-dependent alcohol dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAA CCTACGCTTA CGCGGCGACC GATGCGCAAT CGCCGCTCGC CCCGTTCGAA 
TTCCAGCGCC GCGCGCTGCG CGACCTCGAC GTCCAGATCG AGGTGCTCTA TTGCGGCGTG
TGCCACTCGG ACCTGCACCA GGCCCGCAAC GAATGGCGCA ACACGATCTA CCCGGTCGTG
CCGGGCCATG AAATCGTCGG CCGCGTGACC GCGACCGGCC CGCAGGTGTC GCGCTTCAAG
GTCGGCGAGC TGGTCGGCGT CGGCTGTCTC GTCGATTCGT GCCGCACCTG CCCGAGCTGC
GCGGAAGGCC TCGAACAGTA TTGCGAGAAC GGCTTCGTCG GCACCTACAA CGGCCAGGAC
CGCGTGACGG GCGACATCAC GTACGGCGGC TATTCGACGC AGCTCGTCGT CGACGAGGCG
TTCGTGCTGC GCGTGCCCGA CACGCTGGAC CCGGCCGGCG CCGCGCCGCT GCTGTGCGCG
GGGATCACGA CCTACTCGCC GCTGCGCCAG TGGAACGTCG GGCCCGGCAA GAAGGTCGGG
ATCGTCGGCC TCGGCGGGCT CGGCCACATG GGCGTGAAGC TCGCGCGCGC GATGGGTGCG
CACGTCGTGC TGTTCACGAC CTCGCCGTCG AAGATCGAGG ACGGCAAGCG GCTCGGCGCG
CATGAAGTGG TGATCTCGAA GGACGAAGCG CAGATGAACG CGCACCTGAA CAGCTTCGAC
TTCATCCTCA ACACGGTGGC CGCGCAGCAC GACCTGAACC CGTTCCTGCA CCTGCTGAAG
CGCGACGGCA CGATGACGCT CGTCGGCGCG CCGGAACATG ACCATCCGTC GCCGCAGGTG
TTCAACCTGA TCTTCAAGCG CCGCCGCCTC GCGGGCTCGC TGATCGGCGG GATCGCGGAA
ACGCAGGAAA TGCTCGATTT CTGCGCGGAG CACGGGATCA CGTCGGATAT CGAAACGATT
CCGATGCAGC AGATCAACGC CGCCTACGAG CGCATGCTCA AGAGCGACGT GAAGTATCGC
TTCGTGGTGG ACATGGCGTC GCTCAAGCAG TAA
 
Protein sequence
MSTTYAYAAT DAQSPLAPFE FQRRALRDLD VQIEVLYCGV CHSDLHQARN EWRNTIYPVV 
PGHEIVGRVT ATGPQVSRFK VGELVGVGCL VDSCRTCPSC AEGLEQYCEN GFVGTYNGQD
RVTGDITYGG YSTQLVVDEA FVLRVPDTLD PAGAAPLLCA GITTYSPLRQ WNVGPGKKVG
IVGLGGLGHM GVKLARAMGA HVVLFTTSPS KIEDGKRLGA HEVVISKDEA QMNAHLNSFD
FILNTVAAQH DLNPFLHLLK RDGTMTLVGA PEHDHPSPQV FNLIFKRRRL AGSLIGGIAE
TQEMLDFCAE HGITSDIETI PMQQINAAYE RMLKSDVKYR FVVDMASLKQ