Gene BamMC406_3040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3040 
Symbol 
ID6178682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp3376295 
End bp3377329 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content72% 
IMG OID641682816 
Productpeptidase M48 Ste24p 
Protein accessionYP_001809732 
Protein GI172062080 
COG category[R] General function prediction only 
COG ID[COG4784] Putative Zn-dependent protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.359784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCAATG ATCGCCTGCT TCGCGCCGCA CGCGTCGCCG CCGCACTGAG CGTCGGCGCC 
GCGGCGCTCG GCGCGGCGGC AAGCACGCAT CCGACCGACG CCGGGGCAGC CGCGGCCGGC
TCCGCGGCGG CTGCGCCGTC CACGCCGGCG ACCACCGTCG CGCCGTCCGC CGCCGAAGCC
GCGCAGCCGA GCGGCGCGGC CGTGACGGCG AAAGCCTATA CGCCGACGTC GCAGCAGGTC
CGCTACGGCG ACGCGATCGC GTTCCGCACG CTGATCCCGT CGCCGCTGCT CGAACAGCTG
ACCGCGAGCG AATACGCGCA GATCGTGCAA ACGGCCGCCG ACAGCGACCG CCTGCTGCCG
GCGAACCAGC CGCGCGTGAA ACGCCTGCGC GCGATCGTCA TGAAGCTGGC GCCGTATTCG
GTGAAGTGGA ACGACCGCGT GAAGAGCTGG GCGTGGGACG TCAATGCGAT CCGCTCGCGC
GACATCCGCG TCACGTGCCT GCCGGGCGGC AAGGTGCTCG TGTACGGCGG GATGCTCGAT
CGCGTCCGCC TGAACGACGA CGAGCTCGGC GTGCTGCTCG CGCACGGCAT CGCCCATGCG
CTGCGCGAAC ACGCACGCAG CAATCTCAGC ACGGCGTCGC AAACGTCGCT GCGCGCGGCC
GCGCTGCCGC CGCTGTTCGG CGTCGGCGAT CCGCTGCCGC AGGCGCTGAA CCTCGGCGCA
CGTCTGCAGA CGCTGCGCTA CGACCCGACC GACGAAACCG AAGCCGACGT GATCGGCGGC
GACATCGCCG CCCGCGCGGG GTTCGATCCG CGCGCGGCGA TCACGCTGTG GGACAAGCTC
GCGGCGGCCA CCCGCGCGAA CAAGACGTCG GGCTTCATCT ATACGCATCC GTACGGCGCG
ACGCGGCGGC AGGATCTGCT GAACCGGCTG CAGGACCTGA TGCCGCTGTA TGCGAAGGCG
ACGGGCAAGC GCGTCGACAC GCTGCCCGAC TATGCGGGCA TCAGCGCGCA GCGGCGCAAG
GTCGCGCGGC GCTGA
 
Protein sequence
MRNDRLLRAA RVAAALSVGA AALGAAASTH PTDAGAAAAG SAAAAPSTPA TTVAPSAAEA 
AQPSGAAVTA KAYTPTSQQV RYGDAIAFRT LIPSPLLEQL TASEYAQIVQ TAADSDRLLP
ANQPRVKRLR AIVMKLAPYS VKWNDRVKSW AWDVNAIRSR DIRVTCLPGG KVLVYGGMLD
RVRLNDDELG VLLAHGIAHA LREHARSNLS TASQTSLRAA ALPPLFGVGD PLPQALNLGA
RLQTLRYDPT DETEADVIGG DIAARAGFDP RAAITLWDKL AAATRANKTS GFIYTHPYGA
TRRQDLLNRL QDLMPLYAKA TGKRVDTLPD YAGISAQRRK VARR