Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3040 |
Symbol | |
ID | 6178682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 3376295 |
End bp | 3377329 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641682816 |
Product | peptidase M48 Ste24p |
Protein accession | YP_001809732 |
Protein GI | 172062080 |
COG category | [R] General function prediction only |
COG ID | [COG4784] Putative Zn-dependent protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.359784 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCAATG ATCGCCTGCT TCGCGCCGCA CGCGTCGCCG CCGCACTGAG CGTCGGCGCC GCGGCGCTCG GCGCGGCGGC AAGCACGCAT CCGACCGACG CCGGGGCAGC CGCGGCCGGC TCCGCGGCGG CTGCGCCGTC CACGCCGGCG ACCACCGTCG CGCCGTCCGC CGCCGAAGCC GCGCAGCCGA GCGGCGCGGC CGTGACGGCG AAAGCCTATA CGCCGACGTC GCAGCAGGTC CGCTACGGCG ACGCGATCGC GTTCCGCACG CTGATCCCGT CGCCGCTGCT CGAACAGCTG ACCGCGAGCG AATACGCGCA GATCGTGCAA ACGGCCGCCG ACAGCGACCG CCTGCTGCCG GCGAACCAGC CGCGCGTGAA ACGCCTGCGC GCGATCGTCA TGAAGCTGGC GCCGTATTCG GTGAAGTGGA ACGACCGCGT GAAGAGCTGG GCGTGGGACG TCAATGCGAT CCGCTCGCGC GACATCCGCG TCACGTGCCT GCCGGGCGGC AAGGTGCTCG TGTACGGCGG GATGCTCGAT CGCGTCCGCC TGAACGACGA CGAGCTCGGC GTGCTGCTCG CGCACGGCAT CGCCCATGCG CTGCGCGAAC ACGCACGCAG CAATCTCAGC ACGGCGTCGC AAACGTCGCT GCGCGCGGCC GCGCTGCCGC CGCTGTTCGG CGTCGGCGAT CCGCTGCCGC AGGCGCTGAA CCTCGGCGCA CGTCTGCAGA CGCTGCGCTA CGACCCGACC GACGAAACCG AAGCCGACGT GATCGGCGGC GACATCGCCG CCCGCGCGGG GTTCGATCCG CGCGCGGCGA TCACGCTGTG GGACAAGCTC GCGGCGGCCA CCCGCGCGAA CAAGACGTCG GGCTTCATCT ATACGCATCC GTACGGCGCG ACGCGGCGGC AGGATCTGCT GAACCGGCTG CAGGACCTGA TGCCGCTGTA TGCGAAGGCG ACGGGCAAGC GCGTCGACAC GCTGCCCGAC TATGCGGGCA TCAGCGCGCA GCGGCGCAAG GTCGCGCGGC GCTGA
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Protein sequence | MRNDRLLRAA RVAAALSVGA AALGAAASTH PTDAGAAAAG SAAAAPSTPA TTVAPSAAEA AQPSGAAVTA KAYTPTSQQV RYGDAIAFRT LIPSPLLEQL TASEYAQIVQ TAADSDRLLP ANQPRVKRLR AIVMKLAPYS VKWNDRVKSW AWDVNAIRSR DIRVTCLPGG KVLVYGGMLD RVRLNDDELG VLLAHGIAHA LREHARSNLS TASQTSLRAA ALPPLFGVGD PLPQALNLGA RLQTLRYDPT DETEADVIGG DIAARAGFDP RAAITLWDKL AAATRANKTS GFIYTHPYGA TRRQDLLNRL QDLMPLYAKA TGKRVDTLPD YAGISAQRRK VARR
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