| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3033 |
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| Symbol | |
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| ID | 6178774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 3365791 |
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| End bp | 3366522 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641682809 |
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| Product | Pili assembly chaperone, N-terminal |
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| Protein accession | YP_001809725 |
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| Protein GI | 172062073 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGTTAG GGAAATGGAA GGGCGTCGTG GCGGCTTGCG TGTTGGGCGC AATGGCACTG
TCGGCCGAAG CGGCGATCGT GATCACGGGC ACGCGGGTTG TCTACCCTGA GCAAAATCGC
GAAGTCAATG TGCGCTTGGC CAACGTCGAG ACGGCGCCCG TGCTGGTACA GGCGTGGGTC
GACGACGGTC GTGCGGATGC GAATCCCGAT GAGATCAAGG TGCCGTTCGT GCTGATGCCG
CCGGTGTTTC GCGTCGAGCC TCAAAAAGGG CAGACGTTGC GCATCATGTA CACGGGCACG
GATTTGCCGG CGGATCGCGA GTCGGTGTTC TGGCTCAACG TGCAGGAGAT TCCGCCGAAG
CCTACCAACG CGGAAGAAAC GAACCTGCTG CAACTGGCCT TTCGTACCCG CATCAAGCTG
TTTTTCCGCC CGGTCGCGCT TCAGGACGGC CCTTCGGGCC AGTTGCTGAA GTGGCAGGTC
GCGCACGGCG ACAAAGGGCA GAGCGTCCTG CGCGTCGACA ATCCCTCGCC CTATTACGTG
TCGTTCAGCC GTGTTGCGCT GAAGGCGGGC GACACCGAAA TCCAGTTCGA CCCGGCCATG
GTGCCGCCGT TCGACCATGT GTCGTTCACG CAACCGCAGG GCGCGCATCG CACGTTCGCG
CGAGGCACGG TTTCGTACAA ACTGCTCAAC GATTACGGTG CGGAGGTGGT GGGCACGGCC
ACCGTCCAAT AA
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| Protein sequence | MQLGKWKGVV AACVLGAMAL SAEAAIVITG TRVVYPEQNR EVNVRLANVE TAPVLVQAWV
DDGRADANPD EIKVPFVLMP PVFRVEPQKG QTLRIMYTGT DLPADRESVF WLNVQEIPPK
PTNAEETNLL QLAFRTRIKL FFRPVALQDG PSGQLLKWQV AHGDKGQSVL RVDNPSPYYV
SFSRVALKAG DTEIQFDPAM VPPFDHVSFT QPQGAHRTFA RGTVSYKLLN DYGAEVVGTA
TVQ
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