Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3027 |
Symbol | |
ID | 6178981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 3357516 |
End bp | 3359015 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641682803 |
Product | EvpB family type VI secretion protein |
Protein accession | YP_001809719 |
Protein GI | 172062067 |
COG category | [S] Function unknown |
COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGTAC GTGAATCGCA GGCGCGCGCT GCCGAGGCGC AGCTCGGAGC CCAATCGGAT TTCAACGCGC TGTTGTCGCG TGAGTTCAAG CCCAAGACCG AACAGGCGCG CGAGGCGGTG GAGTCTGCCG TCAAGACGCT CGCCGAGCAG GCATTGGCCA ATTCGGTGAC GATGTCGGAC GACGCCTACA AGAGTATCGA GGCGATCATC GGCGAGATCG ACCGCAAGTT GTCGGAGCAG ATCAACCTGA TTCTGCACCA CGACGATTTC CAGAAGCTGG AAAGCGCGTG GCGTGGATTG CATCATCTCG TGACCAACAC GGAAACCGAC GAGAAGCTGA AAATCCGCTT CATGGACGTG TCCAAGGAAG ACCTGCGTCG CACGATGAAG CGCTACAAGG GCGTGGCTTG GGATCAGAGC CCGTTCTTCA AGCAGATCTA CGAAGAGGAG TACGGACAGT TGGGCGGGGA GCCGTACGGC TGCCTGGTGG CCGACTATTA TTTCGACCAC ACGCCGCCGG ACGTCGATCT GCTCGCATCG ATCGGCAAGG TCGCCGCGGC CGCGCACGCA CCGTTCATTA CGGGCGCGTC GCCGTCCGTG CTGCAGATGG ATTCGTGGCA GGAGCTCGCG AACCCGCGCG ATCTGACCAA GATTTTCACG CAGAACCTCG AGTACGCACC GTGGAACTCG CTGCGTAACT CCGAAGACTC TCGCTACATT GGTCTTGCCA TGCCGCGCTT CCTCGCGCGG CTGCCGTACG GCATTCGCAC CAATCCGGTC GACGAATTCG ATTTCGAAGA GTCGACCGAC GGCTCGGATC ACCGCAAGTA CTCGTGGGCG AACGCGGCTT ATGCGATGGC GGTCAACATC AATCGATCGT TCAAGCACTA CGGCTGGTGC ACGCTGATTC GCGGCGTCGA GAGCGGCGGC GTGGTCGAAA ATCTGCCGTG CCATACGTTC CCGACCGACG ACGGCGGCAT CGACATGAAG TGCCCGACCG AGATCGCGAT TTCGGACCGG CGCGAGGCGG AGCTTTCGAA GAACGGTTTC ATTCCGCTGA TCCACCGCAA GAATACCGAT TACGCGGCGT TCATCGGCGC CCAGTCGCTG CAGAAGCCTG CCGAGTACTA CGATCCGGAC GCGACGGCCA ACGCGAATCT TTCCGCGCGT CTGCCGTATC TGTTTGCGTG CTCGCGTTTC GCGCACTACC TGAAGTGCAT CGTGCGCGAC AAGATCGGCT CGTTCAAGGA GCGCGACGAA ATGCAGCAAT GGCTCAACGA ATGGATCATG TACTACGTTG ACGCCGATCC CGCGAACTCG TCTCAGGAAA CCAAGGCGCG TCGCCCGCTG GCCGCTGCCG AGGTGGTCGT GGAAGAAGTC GAGGGCAACC CCGGCTACTA CCAGGCGAAA TTCTTCCTGC GCCCGCACTT CCAGCTGGAA GGTCTGACCG TGTCGCTGCG GCTCGTCGCG AAGCTTCCGT CGGTCAAGGC CGCTGCCTGA
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Protein sequence | MAVRESQARA AEAQLGAQSD FNALLSREFK PKTEQAREAV ESAVKTLAEQ ALANSVTMSD DAYKSIEAII GEIDRKLSEQ INLILHHDDF QKLESAWRGL HHLVTNTETD EKLKIRFMDV SKEDLRRTMK RYKGVAWDQS PFFKQIYEEE YGQLGGEPYG CLVADYYFDH TPPDVDLLAS IGKVAAAAHA PFITGASPSV LQMDSWQELA NPRDLTKIFT QNLEYAPWNS LRNSEDSRYI GLAMPRFLAR LPYGIRTNPV DEFDFEESTD GSDHRKYSWA NAAYAMAVNI NRSFKHYGWC TLIRGVESGG VVENLPCHTF PTDDGGIDMK CPTEIAISDR REAELSKNGF IPLIHRKNTD YAAFIGAQSL QKPAEYYDPD ATANANLSAR LPYLFACSRF AHYLKCIVRD KIGSFKERDE MQQWLNEWIM YYVDADPANS SQETKARRPL AAAEVVVEEV EGNPGYYQAK FFLRPHFQLE GLTVSLRLVA KLPSVKAAA
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