| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3011 |
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| Symbol | |
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| ID | 6179079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 3334063 |
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| End bp | 3334584 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641682787 |
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| Product | type VI secretion system lysozyme-related protein |
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| Protein accession | YP_001809703 |
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| Protein GI | 172062051 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3518] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03357] type VI secretion system lysozyme-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0617913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGTC ATCCTGAAGA TCAGCACCGG CCCGCGTACC TGCCGTCCTT GCTCGACCGG
CTGCAGGACG ACGCGCCGCA CGCTCGCCAT GAAGTCGCGC GCGCGTATGC ACCGAGCGGC
GAAGGCATGC GCCGGATCAT CCAACGCGAC CTCGCGCTGC TACTCAACGC GACCAACCTC
GACGGCGAGC TCGACTCCGC ACGGTACCCG CAGGCCGCCG CGTCCGTCGT CAACTACGGC
GTGCCGCCGT TGTCGGGAAG CTACCTGAGC GACCGGAACT GGGAAACGAT CGAGACACTC
GTCAAGACCG CGATCGTCCG TTTCGAACCC CGCCTGCTCC CCGATTCGAT CGCGATCCGG
CCCCTCGCAG GGCGCGAAGC CGCCAGTTAC AACAAGCTGG CATTCGAGAT TCGCGGGCTG
ATGCAATGGT CGCCGTACCC CCTCGAGTTC CTGATTCAAA GCACCTTCGA TATCGAATCG
AACAAGGTGA CGCTCGATCC GGGCGCTCGC ATCGAACATT GA
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| Protein sequence | MARHPEDQHR PAYLPSLLDR LQDDAPHARH EVARAYAPSG EGMRRIIQRD LALLLNATNL
DGELDSARYP QAAASVVNYG VPPLSGSYLS DRNWETIETL VKTAIVRFEP RLLPDSIAIR
PLAGREAASY NKLAFEIRGL MQWSPYPLEF LIQSTFDIES NKVTLDPGAR IEH
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