| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3010 |
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| Symbol | |
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| ID | 6179082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 3333225 |
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| End bp | 3334079 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641682786 |
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| Product | virulence protein SciE type |
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| Protein accession | YP_001809702 |
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| Protein GI | 172062050 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4455] Protein of avirulence locus involved in temperature-dependent protein secretion |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.177005 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCC CTGATACCAC CACGCCAGCC ACTGGCCGCC CAGCAGTGCA GAACCTGCTG
CAGACCCAGT CGCTCGACGC GCTGAAAGAG CAAACCATCG AAGCGGTGCG TCAGCGGCCG
TCCGACCCGT CCGAACGCTG GCTGCTGTTC CAGCTGCTGT GCGTCGACGG CGACTGGGAA
CGCGCGCTCA AGCAGTTGCA GACCTGGGCA ACATTGGAGC CCGAAGGCAC TGCACGCGCG
CAGCTGCATC GCGGCCTCAT CGAAGGCGAG ATGTTCCGCA CGGAGGTATT CGCCGGCACG
CGCACTCCCG GCTTCGTCGA CGAAGCCACG CCCGCGTGGA TCGACCAGTT GCTGCAGGCG
AATGTCCGGC TCGGCGCCGG CGACGTGGCG GGCGCCGACG CGCTGCGCGA GGCCGCGCTC
GACGCGGCGC CAGCCAGTCG AGGCGAAAGC GCCGAAATGG GTGACTTCGC ATGGCTGACC
GACAGCGACA CGCGACTCGG CCCCGTCTGC GAAATGGTCG TTGCAGGCGG TTACCGGTGG
ATTCCGTTCG CCCGCATCAA GTCGCTCACG CTCACCCCGA TCGGCACGCT GACCGATCTC
GTATGGCGGC CTGCCACGCT GATCCTGCGC GATGCCACGG TTCTCAGGGG GTACGTGCCG
ACCCGCTACC CGGGCTCGGA GCATGGTCCC GCCGCCGTCC GGCTCGCGCG CGAAACCCGC
TGGCAGGACA TCGGCGAAAC GAACGTGATC GCACTCGGAC AAAAAACCTG GACGACCAAC
TGCGGCGACT GGGGCCTGCT GGATATCGGC GGCTGCCGCT TCACCGATGA AGACGCAGAT
GGCACGTCAT CCTGA
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| Protein sequence | MNAPDTTTPA TGRPAVQNLL QTQSLDALKE QTIEAVRQRP SDPSERWLLF QLLCVDGDWE
RALKQLQTWA TLEPEGTARA QLHRGLIEGE MFRTEVFAGT RTPGFVDEAT PAWIDQLLQA
NVRLGAGDVA GADALREAAL DAAPASRGES AEMGDFAWLT DSDTRLGPVC EMVVAGGYRW
IPFARIKSLT LTPIGTLTDL VWRPATLILR DATVLRGYVP TRYPGSEHGP AAVRLARETR
WQDIGETNVI ALGQKTWTTN CGDWGLLDIG GCRFTDEDAD GTSS
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