| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2996 |
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| Symbol | xerC |
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| ID | 6176434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 3317338 |
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| End bp | 3318258 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641682772 |
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| Product | site-specific tyrosine recombinase XerC |
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| Protein accession | YP_001809688 |
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| Protein GI | 172062036 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4973] Site-specific recombinase XerC |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0374572 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACG ATCCGATCGC CGCCTACCTG TCGAACCTGA AGCACGTCAG GCAGCTGTCG
GAACACACGC TGCGTGCGTA CACGCATGAA CTCGACGAAC TGAAGAAGCT CGCCGCCGGT
CGCCCGCTCG ACACGCTGAC GGCCGTCGAC ATGCGCGGCG CGGTCGCGCG CGCGCATGCG
GGCGGATTGT CGGCGCGCTC GATCTCGCAC CGGCTGTCCG CCTGGCGCGC GTTCTACCGC
TGGCTCGCGC AGCACATCGA GATGCCCGCG AACCCGGTCG CCGCCGTGCG CGCGCCGAAG
CGCCCGAAAA CCTTGCCGAA AGCGCTGTCG GTCGACGACG CCTCGGCGCT GATGGACGCG
CCGCTCGCCG GCACGACCGA AGGCATCCGC GATCACGCGA TCCTCGAGCT GTTCTATTCG
TCGGGGCTGC GCCTCGCCGA ACTGGTCGGG CTCGACGTCA GGTACACGCA GGCCGACGGC
TACCGCTCGG CCGGCTGGCT CGATCTCGCC GAAGCCGAAG TCACCGTGCG CGGCAAGGGC
AACAAGGAAC GCAAGGTGCC GGTCGGCCGC AAGGCGATCG ATGCGCTGAA CGCGTGGCTC
GCGGTGCGCG GCGAATTCGT GAAGCACGAC CCGCATCCGC TGTTCGTGTC CGTGCGCGGC
AACCGGATGG CGCCGGGCGT CGTGCGCGAG CGCGTGAAGC GCGCGGCGCT CGCCGCGGGC
ATCCCCGCCA ACGTCCACCC GCACGTGCTG CGCCATTCGT TCGCGACGCA CGTGCTGCAG
TCGAGCGGCG ACTTGCGCGC GGTGCAGGAA CTGCTGGGCC ACGCGAGCAT CTCCGCGACG
CAGGTCTACA CGTCGCTCGA CTTCCAGCAC CTCGCGAAGA TTTACGACAG CGCGCATCCG
CGCGCGAAGA AGCGCGACTG A
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| Protein sequence | MTDDPIAAYL SNLKHVRQLS EHTLRAYTHE LDELKKLAAG RPLDTLTAVD MRGAVARAHA
GGLSARSISH RLSAWRAFYR WLAQHIEMPA NPVAAVRAPK RPKTLPKALS VDDASALMDA
PLAGTTEGIR DHAILELFYS SGLRLAELVG LDVRYTQADG YRSAGWLDLA EAEVTVRGKG
NKERKVPVGR KAIDALNAWL AVRGEFVKHD PHPLFVSVRG NRMAPGVVRE RVKRAALAAG
IPANVHPHVL RHSFATHVLQ SSGDLRAVQE LLGHASISAT QVYTSLDFQH LAKIYDSAHP
RAKKRD
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