Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2995 |
Symbol | |
ID | 6176501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 3316599 |
End bp | 3317324 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641682771 |
Product | hypothetical protein |
Protein accession | YP_001809687 |
Protein GI | 172062035 |
COG category | [S] Function unknown |
COG ID | [COG3159] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0364868 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGATC GCGAAGTCGC CGACTACCTG CTCGCCAATC CCGAATTCTT CGCGCAGCAT GCCGAACTGC TCGCGACGAT CCGCCTCGCG AACCCGCACG GCAAGGCCGC GATCTCGCTG CAGGAGCGGC AGATGGAGAT GCTGCGCGAC AAGAACAAGC ATCTCGAGCG CCGGCTCGCC GAGCTCGTGC GCTACGGCCA CGAGAACGAC AGCCTGTCCG CGAAGTTCAG CCGCTGGACC GCGCGCGTGA TCGCGGAACG CGACCCGTAC GCGCTGCCGC GCACGATCGC CGAAGGCATC GCCGACGTGT TCGACGTGCC GCAGACCGCG CTGCGCGTAT GGGACGTCGC CGACACCTAC GCGCAGGCCG ATTTCGCGCG CCAGGTCGGC GAGGAAGTGC GGCTGTTCAC GAACGGGCTG TCGACGCCGT ACTGCGGCGC GAACACCGGT TTCGAAGCCG CCCAGTGGCT CGCGCCCGCG CTCGCGGCAC CGGCCGCGAA TGCAGCGGAA GGCGCCGAAG CCGCGCCGGC CGGCGACGGC GCGGCCACGT CGGTCGCGCT GCTCGCGCTG CGCGCGCCGC TCGCCGGCAC CGATGCGCCC GCGTTCGGCC TGCTCGTGCT CGGCTCGCCC GATCCGCGCC GCTTCCACGA CGGGATGGCG ACCGACTTCC TCGCGCAGAT CGCGACGCTT GCGAGCGCCG CGCTCACGCG CCTGCTGCCG CACTGA
|
Protein sequence | MNDREVADYL LANPEFFAQH AELLATIRLA NPHGKAAISL QERQMEMLRD KNKHLERRLA ELVRYGHEND SLSAKFSRWT ARVIAERDPY ALPRTIAEGI ADVFDVPQTA LRVWDVADTY AQADFARQVG EEVRLFTNGL STPYCGANTG FEAAQWLAPA LAAPAANAAE GAEAAPAGDG AATSVALLAL RAPLAGTDAP AFGLLVLGSP DPRRFHDGMA TDFLAQIATL ASAALTRLLP H
|
| |