Gene BamMC406_2995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2995 
Symbol 
ID6176501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp3316599 
End bp3317324 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content71% 
IMG OID641682771 
Producthypothetical protein 
Protein accessionYP_001809687 
Protein GI172062035 
COG category[S] Function unknown 
COG ID[COG3159] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0364868 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATC GCGAAGTCGC CGACTACCTG CTCGCCAATC CCGAATTCTT CGCGCAGCAT 
GCCGAACTGC TCGCGACGAT CCGCCTCGCG AACCCGCACG GCAAGGCCGC GATCTCGCTG
CAGGAGCGGC AGATGGAGAT GCTGCGCGAC AAGAACAAGC ATCTCGAGCG CCGGCTCGCC
GAGCTCGTGC GCTACGGCCA CGAGAACGAC AGCCTGTCCG CGAAGTTCAG CCGCTGGACC
GCGCGCGTGA TCGCGGAACG CGACCCGTAC GCGCTGCCGC GCACGATCGC CGAAGGCATC
GCCGACGTGT TCGACGTGCC GCAGACCGCG CTGCGCGTAT GGGACGTCGC CGACACCTAC
GCGCAGGCCG ATTTCGCGCG CCAGGTCGGC GAGGAAGTGC GGCTGTTCAC GAACGGGCTG
TCGACGCCGT ACTGCGGCGC GAACACCGGT TTCGAAGCCG CCCAGTGGCT CGCGCCCGCG
CTCGCGGCAC CGGCCGCGAA TGCAGCGGAA GGCGCCGAAG CCGCGCCGGC CGGCGACGGC
GCGGCCACGT CGGTCGCGCT GCTCGCGCTG CGCGCGCCGC TCGCCGGCAC CGATGCGCCC
GCGTTCGGCC TGCTCGTGCT CGGCTCGCCC GATCCGCGCC GCTTCCACGA CGGGATGGCG
ACCGACTTCC TCGCGCAGAT CGCGACGCTT GCGAGCGCCG CGCTCACGCG CCTGCTGCCG
CACTGA
 
Protein sequence
MNDREVADYL LANPEFFAQH AELLATIRLA NPHGKAAISL QERQMEMLRD KNKHLERRLA 
ELVRYGHEND SLSAKFSRWT ARVIAERDPY ALPRTIAEGI ADVFDVPQTA LRVWDVADTY
AQADFARQVG EEVRLFTNGL STPYCGANTG FEAAQWLAPA LAAPAANAAE GAEAAPAGDG
AATSVALLAL RAPLAGTDAP AFGLLVLGSP DPRRFHDGMA TDFLAQIATL ASAALTRLLP
H