Gene BamMC406_2993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2993 
Symbol 
ID6177208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp3314575 
End bp3315459 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content67% 
IMG OID641682769 
Productlipid A biosynthesis lauroyl acyltransferase 
Protein accessionYP_001809685 
Protein GI172062033 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0374572 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAGGCC GCCTCGGCAC GCATCTCGCC ATCGGCTTTC TGAAGCTGCT CGCCCTGCTG 
CCGTACGGTG TGACCGCGCG CTTCGGCGAT GGCCTCGGCT GGCTGCTGTA CCAGATTCCC
AGCCGGCGAA AGCGCATCGT ACATACCAAC CTGAAACTCT GCTTCCCCGA CTGGAGCGAC
GAACGGCGCG AGGAAGTGGC CGGCCAGCAT TTCCGCCATG CGATCCGCAG CTACGTCGAG
CGCAGCTATC AGTGGTTCGC GTCGGAAGAG GCCTACCGCA AGCTGTTCAC GATCGACAGC
GAGATCGACC TGAGCGATCC GGACATGCCG CCCACGCTCC TGCTCGGTCT CCATTTCGTC
GGCATCGAGG CCGGCTCGAT GGCGCTCAAT CTCGCGCTCG ACCGGCCGTG CGGCTCGCTC
TACACGCCGA TGAAGAACCC GGAAATCGAC GCCGCCGCCA AAGCCGGCCG CAGCCGCTTC
GGTGCGGAAC TGGCGGGCCG CGCGGACAGC GCGCGCATCG TGCTGCGCTG GCTGCGCGAC
CGCAAGCCCG TGATGCTGGG CGCCGACATG GACTACGGGC TGCGCAATTC GACGTTCGTG
CCCTTCTTCG GCGTACCCGC CTGCACGCTG ACGGCCGTCG GCCGCCTCGC GAAGACGGGC
CGCGCGCAGG TCGTGCCGTT CATCGGCGAG GTGCTGCCGA ACTACAAGGG CTACCGGCTG
AAGGTGTTCA AGCCGTGGGA CCACTACCCG ACCGGCGACG ACGATCTCGA CGCGCGGCGG
ATGAACGAAT TCCTCGAGGA ACAGATCCCG CTGATGCCCG AGCAGTACTA CTGGGTGCAC
AAGCGCTTCA AGACGCGCCC GCCCGGCGAG CCGAGCCTGT ACTGA
 
Protein sequence
MLGRLGTHLA IGFLKLLALL PYGVTARFGD GLGWLLYQIP SRRKRIVHTN LKLCFPDWSD 
ERREEVAGQH FRHAIRSYVE RSYQWFASEE AYRKLFTIDS EIDLSDPDMP PTLLLGLHFV
GIEAGSMALN LALDRPCGSL YTPMKNPEID AAAKAGRSRF GAELAGRADS ARIVLRWLRD
RKPVMLGADM DYGLRNSTFV PFFGVPACTL TAVGRLAKTG RAQVVPFIGE VLPNYKGYRL
KVFKPWDHYP TGDDDLDARR MNEFLEEQIP LMPEQYYWVH KRFKTRPPGE PSLY