Gene BamMC406_2973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2973 
Symbol 
ID6176528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp3294526 
End bp3294960 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content72% 
IMG OID641682749 
Productflagellar protein FliS 
Protein accessionYP_001809665 
Protein GI172062013 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1516] Flagellin-specific chaperone FliS 
TIGRFAM ID[TIGR00208] flagellar biosynthetic protein FliS 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.126092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.189751 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTCCC CAGGACACGC TGGAGCCAGT GCGTACGCGC GTGTCGGCGT CGAGACGGGG 
GTGATGGGCG CCTCCCCGCA CCGGCTGATC GCGATGCTGT ACCAGGGCGC GCGGCAGGCC
ATCGCGCTCG CGCGCATGCA CCTGCAGCAG GGCAACGTGC CCGCACGCGG CGAAGCGATC
GGCAAGGCGA TCGGGATCGT CGAGAGCGGG CTGCAGGCGG CGCTGAACCG CGACGCGGGC
GGCGAGATCG CCGGGCGCCT GGACGCGCTG TACGCCTATA TCGTGCGGCG CCTGCTGGAA
GCCAACATGC GCGCGAGCGA CGCGATGCTG GTCGAGGTCG ACGGACTGCT CGCCACGCTC
GAGGAAGCGT GGACGGGCAT CGCCCCCGAA GTCGCGCGGA TGACCGCGCA ACAGGCGGCG
GACGCGGCGC GATGA
 
Protein sequence
MFSPGHAGAS AYARVGVETG VMGASPHRLI AMLYQGARQA IALARMHLQQ GNVPARGEAI 
GKAIGIVESG LQAALNRDAG GEIAGRLDAL YAYIVRRLLE ANMRASDAML VEVDGLLATL
EEAWTGIAPE VARMTAQQAA DAAR