| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2965 |
|---|
| Symbol | |
|---|
| ID | 6177023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 3286964 |
|---|
| End bp | 3287779 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641682741 |
|---|
| Product | putative signal transduction histidine kinase |
|---|
| Protein accession | YP_001809657 |
|---|
| Protein GI | 172062005 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.314596 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATACGT CGCTCAACGC GCCCCCCGGC GCCCACGCCC CGTTCCCGTC GCGGCCGCTC
GTGCACAGCC GCATTGCGGC CGCACCCGTG GCCGAAGCCC TGCCCAAGCG CGACGCATCC
GCCGCCCGGA TCGCGACGCT GTCCAGCCAA TTGATGGCAG CCGACGAAGC CGCCCGCCGC
CATCTGGCCG GCGAACTGCA TGACGGGCTC GGCGCCGAAC TCACCGCCGC CCGCTTCGCG
CTCGCAAACG TTCAAACGTG GCTGCCGGCC GATGCGCCCG AAGGCTGCCT GCGCGCGCTC
GAACTGGCGC AGCAGGCACT CGACGCCGCG ACCGATGCGA ACCGCCGCCT GATCGACGAG
CGCGACACGC CGGCGCTCGA CGGCGGGCTC GTCGGCGCGC TGTCGACGTG GGTCGGCAGC
CACGCGGCCC GCACCGGCCT GCGCACGAGC TTCGTCTGCG CGGCCGACGC ACGGCTCACG
CAGCTCGCCG GCGCGAGCGC GCTTGCGATC TTCCGCGTCG CGCAGGAAGC GCTGTCGAAC
GTCGCGAAGC ATGCGCGCGC GGCGTCCGTC GACGTGCGGA TCGACACGGA CGGCTCGCAT
CTGTCCCTGA TCGTCACCGA TGATGGGACC GGTTTCTCGC GCCACCGGCG TGTCGGCTAC
GGCCTCGCCG GCATGCGCGC ACGCTGCGAG GCGTTCGGCG GCAGCTTCGA CACGCGCGCG
CCGGAATCGG GCCGCGGCAC GCGCATCACC GCGCGTTTCG CATGGAACTC GCTATTCGCG
GTGCCGGCCG CCGCGCGCCG CGCGTCGCTT TCGTGA
|
|---|
| Protein sequence | MDTSLNAPPG AHAPFPSRPL VHSRIAAAPV AEALPKRDAS AARIATLSSQ LMAADEAARR
HLAGELHDGL GAELTAARFA LANVQTWLPA DAPEGCLRAL ELAQQALDAA TDANRRLIDE
RDTPALDGGL VGALSTWVGS HAARTGLRTS FVCAADARLT QLAGASALAI FRVAQEALSN
VAKHARAASV DVRIDTDGSH LSLIVTDDGT GFSRHRRVGY GLAGMRARCE AFGGSFDTRA
PESGRGTRIT ARFAWNSLFA VPAAARRASL S
|
|---|
| |