Gene BamMC406_2955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2955 
Symbol 
ID6177547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp3275848 
End bp3276858 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content67% 
IMG OID641682731 
Productalkaline phosphatase 
Protein accessionYP_001809647 
Protein GI172061995 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCACAT TCGTGTTGCG CCGCGTGGGC ATGGTGATCC CGACCTTCAT CGGCATCACC 
ATCCTGGCGT TTGCGCTGAT TCACCTGATA CCGGGCGACC CCATCGAAGT GATGATGGGC
GAGCGCGGCG TCGATCCCGC GATGCATGCG GAGGCAATGA AACGGCTCGG CCTCGACCAG
CCGCTGCCGC TGCAGTACAT CCACTACATC GGCCGTGCGC TGCACGGCGA CCTCGGCACG
TCGATCATCA CCAATACCAG CGTCGCGGGC GAATTCTTCG CGCGCTTCCC GGCGACCGTC
GAGCTGTCGC TGTGTGCGCT CGTGTTCGCG CTCGCGGTCG GCCTGCCGGC CGGCGTGATC
GCCGCGCTGC GACGCGGCTC GGCCATCGAT CACGGCGTGA TGGGCACCGC GCTCACCGGC
TACTCGATGC CGATCTTCTG GTGGGGGCTG ATCCTCATCA TGGTGTTTTC GTCGTATCTC
GGCTGGACGC CCGTGTCGGG GCGCATCGCG GTCGAATACG ACTTCCCGCA TCCGACGGGC
TTCATGCTGA TCGACGCGCT GCTCGCGCCG GACGAAGGCG CGTTCAAGTC GGCGGTCAGC
CACCTGATCC TGCCCGCGAT CGTGCTCGGC ACGATCCCGC TCGCGGTGAT CGCGCGGATG
ACGCGCTCGT CGATGCTCGA AGTGCTGCGC GAGGACTACA TCCGCACCGC CCGCGCCAAG
GGGCTGTCGC CCGCGCGCGT GGTCGTCGTG CATGCGCTGC GCAACGCGCT GATCCCGGTC
GTCACCGTGA TCGGCCTGCA GATCGGCACG CTGCTCGCGG GCGCCGTGCT GACCGAGACG
CTCTTTTCGT GGCCCGGTGT CGGCAAGTGG CTGATCGATG CGATCGGCCG TCGCGACTAT
CCGGTCGTCC AGGGCGGCAT CCTGCTGATC GCGACGCTCG TGATCGTCGT GAACCTGGTC
GTCGACCTGC TGTACGGCGT GCTGAATCCG CGCATCCGCC ACACGAGGTA A
 
Protein sequence
MFTFVLRRVG MVIPTFIGIT ILAFALIHLI PGDPIEVMMG ERGVDPAMHA EAMKRLGLDQ 
PLPLQYIHYI GRALHGDLGT SIITNTSVAG EFFARFPATV ELSLCALVFA LAVGLPAGVI
AALRRGSAID HGVMGTALTG YSMPIFWWGL ILIMVFSSYL GWTPVSGRIA VEYDFPHPTG
FMLIDALLAP DEGAFKSAVS HLILPAIVLG TIPLAVIARM TRSSMLEVLR EDYIRTARAK
GLSPARVVVV HALRNALIPV VTVIGLQIGT LLAGAVLTET LFSWPGVGKW LIDAIGRRDY
PVVQGGILLI ATLVIVVNLV VDLLYGVLNP RIRHTR