Gene BamMC406_2949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2949 
Symbol 
ID6178668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp3269326 
End bp3270396 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content73% 
IMG OID641682725 
Producturea amidolyase related protein 
Protein accessionYP_001809641 
Protein GI172061989 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1984] Allophanate hydrolase subunit 2 
TIGRFAM ID[TIGR00724] biotin-dependent carboxylase uncharacterized domain 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.485355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.639437 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGA ACACCGCACC GGGCACGATC GAGGTCGTCC GCGCCGGCCC GCTGTCGACC 
GTGCAGGATC TCGGCCGCCG CGGCACGCGC CATCTCGGCG TCGCGCAGGG CGGCGCGCTC
GACGGCCTCG CGCTCGAGGT CGGCAACCGG CTGGTCGGCA ATCGCCCCGA CGCGGCGGCC
GTCGAAATCA CGATCGGCCC GGCCGCGTTC CGCTTCACGC GCGCGACGCG CATCGCGATC
ACCGGCACCG AATTCGGCGC GACGCTCGAC GGCAAGCCCG TGTATTCATG GTGGAGCCTG
CCGGTCGAGG CCGGGCAGAC GCTCGTGCTG CCGGCCGCGA AGCGCGGGAT GCGCGGCTAC
CTGTGCATCG CGGGCGGCAT CGACGTGCTG CCGATGCTCG GCTCGCGCAG CACCGATCTC
ACGTCGCGCT TCGGCGGCCT CGGCGGCCGC GCGCTGCGCG ACGGCGATCG GCTCCCGGTC
GGCGTGCCGC CGGCCGGCGC CGGCTGCCTC GCGGCCGATG CGCCCGAATT CGGCGTGAAG
GCGCCCATGT GGTGCGCGTT CGTGCGCGTC GACGAACCCC CGCGCCGCCA CCACCGTCCC
GCGCACGCGC CGTGGGCGAT GCCCGTGCGC GTGCTGCCGG GCCCCGACTA CGCGTCGTTC
GCGGCCGATT CGCAGCAGGC GTTCTGGGAC GAGGAATGGC TCGTCACCGC GAACAGCAAC
CGGATGGGCT ATCGCCTCGC CGGCGCCGAG CTCGTGCGCG AGCGGCCGGT CGAGCTGCTG
TCGCACGCGG TGCTGCCCGG CACGATCCAG GTGCCGCCGA ACGGCCAGCC GATCGTGCTG
ATGCACGATG CGCAGACCAC CGGCGGCTAT CCGAAGATCG GCACGGTGAT CCATGCGGAT
CTCTGGAAAC TCGCGCAGGC GCGCCTGAAC CTGCCGATCC GCTTCGTGCG CACGACACGC
GACGCCGCGC GCGCCGCCCT GAGCGCGGAA CGTGCATATC TGCGGCAGAT CGACGTCGCG
ATCGAGATGC GCGAGGAAAC GCGTCGCCGC GAGCAATCGC GCGCGGCGTG A
 
Protein sequence
MSQNTAPGTI EVVRAGPLST VQDLGRRGTR HLGVAQGGAL DGLALEVGNR LVGNRPDAAA 
VEITIGPAAF RFTRATRIAI TGTEFGATLD GKPVYSWWSL PVEAGQTLVL PAAKRGMRGY
LCIAGGIDVL PMLGSRSTDL TSRFGGLGGR ALRDGDRLPV GVPPAGAGCL AADAPEFGVK
APMWCAFVRV DEPPRRHHRP AHAPWAMPVR VLPGPDYASF AADSQQAFWD EEWLVTANSN
RMGYRLAGAE LVRERPVELL SHAVLPGTIQ VPPNGQPIVL MHDAQTTGGY PKIGTVIHAD
LWKLAQARLN LPIRFVRTTR DAARAALSAE RAYLRQIDVA IEMREETRRR EQSRAA