Gene BamMC406_2948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2948 
Symbol 
ID6178431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp3268673 
End bp3269329 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content73% 
IMG OID641682724 
Productallophanate hydrolase subunit 1 
Protein accessionYP_001809640 
Protein GI172061988 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2049] Allophanate hydrolase subunit 1 
TIGRFAM ID[TIGR00370] conserved hypothetical protein TIGR00370 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.564581 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAC CCCGCATTTA TCCGCTCGGC GATGCCGCCC TCGTCTGCGA GGTGCCGCCG 
CCCGCCACGC TCGATTGCCA GCGCCGCGTC TGGGCCGTCG CCGAGGTCGC GCGCGCGTGG
CCTGACGTGA TCGACGTCGT GCCGGGCATG AACAATCTGA CGATCGTGTT CGACGCGCTC
GCCGCGACGG CCGAGTCGCT CACGCCGGCG CTGCGCGACG CGTGGGAAAC CGCCGACGTC
GAGCACGCGG AGGGCCGCAA GGTCGAGATT CCCGTCGAAT ACGGCGGCGC CGCCGGCCCC
GACCTGCCGG CCGTCGCCGC GCACACGGGG CTGTCGGCCG ACGAAGTCGT CGCGCGCCAC
GCGGCCGGCG AATACGTCGT GTTCTTCGTC GGCTTCCAGC CGGGCTTCGC GTATCTCGGC
GGCCTCGATG CGTCGCTGCA CACGCCGCGC CGCGCGGCGC CGCGCCTCGA GGTGCCGGCC
GGCTCGGTCG GCATCGGCGG TGCGCAAACA GGCATCTATC CGGCCACGTC GCCCGGCGGC
TGGCAACTGA TCGGCCGCAC GTCGCACGTG CTGTTCGACC CCACGCGGGC GCAGCCGACG
CTGCTGCTGC CCGGCGACCG CGTACGCTTC ACCATTGCCG GAGTCGACGC GACATGA
 
Protein sequence
MTQPRIYPLG DAALVCEVPP PATLDCQRRV WAVAEVARAW PDVIDVVPGM NNLTIVFDAL 
AATAESLTPA LRDAWETADV EHAEGRKVEI PVEYGGAAGP DLPAVAAHTG LSADEVVARH
AAGEYVVFFV GFQPGFAYLG GLDASLHTPR RAAPRLEVPA GSVGIGGAQT GIYPATSPGG
WQLIGRTSHV LFDPTRAQPT LLLPGDRVRF TIAGVDAT