| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2942 |
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| Symbol | cca |
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| ID | 6178416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 3262202 |
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| End bp | 3263443 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641682718 |
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| Product | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase |
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| Protein accession | YP_001809634 |
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| Protein GI | 172061982 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0867052 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.615675 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCT ACGCAGTAGG CGGAGCGATC CGCGACGAAT TGCTCGGCGT GCCGGTGCAG
GACCGCGACT ACGTGGTGGT GGGCGCGACG CCCGAGCAGA TGGTCGCCCA GGGCTTCCGG
CCGGTCGGCA AGGATTTCCC GGTGTTCCTG CATCCGGACA CGCAGGAGGA ATACGCGCTC
GCGCGCACCG AGCGCAAGAC GGCGGCCGGC TATCACGGCT TCCAGTTCTA CTTCGCGCCG
GACGTGACGC TCGACGAGGA TCTCGCGCGG CGCGACCTGA CGATCAACGC GATGGCGCGC
GAAGTGAGCC CGGAGGGCGC GCTGGTCGGG CCGGTGATCG ATCCGTTCGA CGGACAGGCC
GACCTGCGCG CGCGCGTGTT CCGGCACGTG GGCGACGCGT TCGTCGAGGA TCCGGTGCGA
ATCCTGCGGA TCGCGCGTTT TGCCGCGCGC TTCGCGGATT TCACGGTCGC GGACGACACG
CTCGCGCTGA TGCGGCGCAT GGTCGACGCC GGCGAAGCGG ACGCGCTGGT GGCCGAACGC
GTGTGGCAGG AAATCGCGCG CGGACTGATG GAGGCGAAGC CGTCGCGGAT GTTCGCGGTG
CTGCGCGAAT GCGGTGCGCT CGCGCGCGTC CTGCCCGAGG TCGACGCGCT GTGGGGCGTG
CCGCAGCGCG CCGACTACCA CCCGGAAGTC GACACGGGCG TGCACGTGAT GATGGTCGTC
GACTACGCGG CGAAGCAGGG CTACTCGCTG CCGGTGCGCT TCGCGGCGCT CACGCACGAT
CTCGGCAAGG CGACGACGCC CGCCGACGTG CTGCCGCGCC ACGTCGGCCA CGAAGGCCGC
AGCGTCGAGC TCATCAAGCC GTTGTGCGAG CGGCTGCGCG TGCCGAACGA TTGCCGCGAT
CTGGCGCTGG TGGTCGCGCG CGAGCACGGC AACCTGCATC GCGTGATGGA AATGGGCGCG
GCCGCGCTGG TGCGGTTCTT CGAGCGCAGC GATGCGCTGC GCAAGCCGGC GCGCTTCGCG
GAGATGCTGC AGGCGTGCGA ATCGGATGCC CGCGGCCGGC TCGGGCTCGA CACGCAGCCG
TATCCGCAGG CCGAGCGGCT GCGCGTGGCG CTGGTGGCGG CGCGCAGCGT CGACGCGGGC
GCGATCGCGC GGGGTGTCGG CGACGATGTG ATGCAGATCA AGGACGCCGT GCATCGCGCA
CGGGTCGAGG CCGTCAAGCA GGCGCTGGCG ATCGGCGAAT AG
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| Protein sequence | MNIYAVGGAI RDELLGVPVQ DRDYVVVGAT PEQMVAQGFR PVGKDFPVFL HPDTQEEYAL
ARTERKTAAG YHGFQFYFAP DVTLDEDLAR RDLTINAMAR EVSPEGALVG PVIDPFDGQA
DLRARVFRHV GDAFVEDPVR ILRIARFAAR FADFTVADDT LALMRRMVDA GEADALVAER
VWQEIARGLM EAKPSRMFAV LRECGALARV LPEVDALWGV PQRADYHPEV DTGVHVMMVV
DYAAKQGYSL PVRFAALTHD LGKATTPADV LPRHVGHEGR SVELIKPLCE RLRVPNDCRD
LALVVAREHG NLHRVMEMGA AALVRFFERS DALRKPARFA EMLQACESDA RGRLGLDTQP
YPQAERLRVA LVAARSVDAG AIARGVGDDV MQIKDAVHRA RVEAVKQALA IGE
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