Gene BamMC406_2941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2941 
Symbol 
ID6178471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp3261341 
End bp3262156 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content71% 
IMG OID641682717 
ProductXRE family transcriptional regulator 
Protein accessionYP_001809633 
Protein GI172061981 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0631546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.420407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATCG GCCAGCGCAT CCGGCGCCTG CGCCGGGAAG CGAAGAAGAC GCTGCTGGAA 
GTCGCGGCCG AGGCGAACCT GTCGATCGGA TTCCTGTCGC AGGTCGAGCG CAATCTCACC
GGGATCTCGC TGTCGTCGCT CGTCAACGTC GCGACGGCGC TGAACGTGCC GCTCGGCACG
CTGATCGAGC AGCCGCGCCA GGCGCAGCCC GACTCGCGCG CGGGCCGCCG CGAACCGTAC
GCGGTCGACG CCACGTCGCA ATGGTACGAA CGGCTGTCGA CCACCTTCGA TGGCAGCCAG
ATCCACGCGC TCAAGGTCCG GATGATGGAG GGCTACCGTT CGGAATGGGT CGCGCACGGC
GGCGACGAGT TCGTGTACGT GCTGACCGGC CGCGTCTGCT ACACGATCGG CAAGAAGGAT
TACCCGCTGT CGCCCGGCGA CTCGCTGCAC TTCGACGCGC GCAAGCGCCA TCGCGTCGCG
AATGTCGGCG ACGGGCCGGC CGAACTGATC GCGGTCGGCA CGCTGCCGCT CTTCGACGAC
AGTTGCGCCG AGTTCGGATC CGCGACAATG GAAATCAGGC CGCCCGCGCG CGATGCCGGG
CCGACGCCGG GCGAGCCGCG CGTGAGCCGC CGCGAACCGG CGCAGCAACG CGAGCAAGAG
CACGAGCGTC AGCGCGACGC GAACGCGGCC GCGCCTGCCG CCGACCTGCC GGCCCGCGTG
GCGGCCAAGC CCACTGCCGG CAAGCCGCGC GCGACCACGG GCAAACGCCC GGCCGCCACC
ACCCCGGCCC GCGCCACCGC CCGCACGAAG CAATGA
 
Protein sequence
MRIGQRIRRL RREAKKTLLE VAAEANLSIG FLSQVERNLT GISLSSLVNV ATALNVPLGT 
LIEQPRQAQP DSRAGRREPY AVDATSQWYE RLSTTFDGSQ IHALKVRMME GYRSEWVAHG
GDEFVYVLTG RVCYTIGKKD YPLSPGDSLH FDARKRHRVA NVGDGPAELI AVGTLPLFDD
SCAEFGSATM EIRPPARDAG PTPGEPRVSR REPAQQREQE HERQRDANAA APAADLPARV
AAKPTAGKPR ATTGKRPAAT TPARATARTK Q