Gene BamMC406_2918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2918 
Symbol 
ID6178199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp3239372 
End bp3240193 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content70% 
IMG OID641682694 
Producthypothetical protein 
Protein accessionYP_001809610 
Protein GI172061958 
COG category[S] Function unknown 
COG ID[COG3619] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTCG ACGGCGCCAG CCGCAACCTC ACCGTCGCCG CGCTGCTCAC GCTGTCCGGC 
GGCTACCTCG ACGCATACAC GTACGTCGGT CACGGCCACG TGTTCGCGAA CACGATGACC
GGCAACGTCG CGCTGCTCGG CATCAACGTC TCGGCCGGCG AATGGGCGGA GGCGCTGCAT
CACGTGCCGC CGCTCGGTGG CTTCGTGGTC GCGGTGTTCG TCGCGCACCT GTTCGGCCTC
GCCGCGCAGC GCAGCTGGAT GCGTCACACC GCGTTCGTGA GCCTGATCGT GGAGATCGCG
TTTCTCGGCC TCGCCGCGAG CGGACTCGTC GGCGCGTCGA GCGCGTGGCT GATTCCAGGC
ATCTCGTTCG TCGCGACGCT GCAGACGCTG TCGTTCACCC ATCTCGAGGA GCTATCGTAC
ACGTCGGTGA TGACGACCGG CAACCTGCGG CGCGCCGCGC AGAAGCTGTT CGTCGGGCTG
ATTCCGCGCT ACGACGTGCA CGCGCTGCAC GACTCGGCGC TGCTCGCGAC GATCAGCTTC
TGTTTCCTGG CCGGCGCGGT GATCGGCGGC TTCGTGACGC GGCTCGTGCC CGACGTCGCG
CTGTGGGGCG CGGTGCTGCT GCTCGTCGGC GCGTTCGCGG AGATCGTGCG GCGGGCGCGG
CGGCGCGCGG GCGGTGGTGA GAGCGGCGCT GGCAGCGACG GCAGCGACGG CAGCGACGGC
AGCAACGGCA GCGACGGCAG CAACGGCAGC AACGGCAGCA ACGGCAGCAA CGGCAGCCAT
CCCGCCGGCC ACGCGCCACG CGACGCAAAC CCCGCGCGTT AA
 
Protein sequence
MDLDGASRNL TVAALLTLSG GYLDAYTYVG HGHVFANTMT GNVALLGINV SAGEWAEALH 
HVPPLGGFVV AVFVAHLFGL AAQRSWMRHT AFVSLIVEIA FLGLAASGLV GASSAWLIPG
ISFVATLQTL SFTHLEELSY TSVMTTGNLR RAAQKLFVGL IPRYDVHALH DSALLATISF
CFLAGAVIGG FVTRLVPDVA LWGAVLLLVG AFAEIVRRAR RRAGGGESGA GSDGSDGSDG
SNGSDGSNGS NGSNGSNGSH PAGHAPRDAN PAR