Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2917 |
Symbol | |
ID | 6178192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 3238076 |
End bp | 3239230 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641682693 |
Product | porin |
Protein accession | YP_001809609 |
Protein GI | 172061957 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGGAG ACACCAACAA AAAGGGCAAG CTCATGAAGC AGACCACCCG ACTCGCAGCT ATCGCAGGGG GCGCGGCGCT GGCTTTCGCC AGCCAATACG CAGCAGCACA AAGCTCGGTC ACGCTGTGGG GCGTCGCCGA CGCCAGCATC CGTTACCTGA CCAACGCAAA CGCGAAGAAC GACGGCCTGC TGTCGATGGC CAACGGCGCG ATCACGAACA GCCGCTTCGG CATCTACGGC ACGGAAGACC TCGGCGGCGG CCTGAAGGCC GTGTTCAACC TCGAAAGCGG CGTCAACCTG CAGAACGGCG GATTCGCCGA CAGCGGCCGC CTGTTCAACC GCGCAGCGTA CGTCGGCATG CAGAGCCCGT ACGGCACGGT GACCCTCGGC CGCCAGAAGA CCCCGCTGTT CGACCTGCTG GCGGACACCT ACGATCCGCT GACGGTCGGC AACTACCTCG AAAACGCGTG GCTGCCGGTC GCGCTGGGTG GCGGCCTGTA TGCGGACAAC CAGATCAAGT ACACGGGCAA GTTCGCGGGC CTGACCGCGA AGGCGATGTA CTCGACGGGC ACGAATTACG AATCGACCGG CGCGGGCGGC TTCTCCGGCC AGATCCCGGG CTCGCTCGGC AAGGGCAATG CATGGGGCGT GTCGCTGTCG TACGTGGCGG GGCCGCTCAG CATCGCGGCC GGCGCGCAGC AGAACAGCGA CAACTCCGCA CGCAAGCAGA CGATCTACCA CGCGAACGTC GTGTACGCGT TCAGCAAGGC AAAGGTCTAT GCGGGCTACC TGCGCTCGAA GGACGACACC GGTTTCGTCG ACAGCCTGCT CGCGCAGCAG TCGATCCCGG TCGCGAAGGG CACGGGCCGG ATCGACGATG GTCCGTTCGC GGGCGTGAGC TGGCAGGTCA GCACGCCGCT GACGCTGACG GGCGCGTTCT ACTACGACCA CATGCGCAAC GCGATGACCA CGAACGGCAC GCTCGCGAGC GGCAACCGCT ACGCGATCGT CGGCATCGCC GAATACGCGC TGAGCAAGCG CACGGAAGTC TACGGCACCG TCGACTTCAA CAAGACGAAC GGCGCGGCGA ACGTCGAGCT GCCGGGTCGC AGCAACCAGA CCGGCATCGC GATCGGCCTG CGCAATATCT TCTGA
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Protein sequence | MNGDTNKKGK LMKQTTRLAA IAGGAALAFA SQYAAAQSSV TLWGVADASI RYLTNANAKN DGLLSMANGA ITNSRFGIYG TEDLGGGLKA VFNLESGVNL QNGGFADSGR LFNRAAYVGM QSPYGTVTLG RQKTPLFDLL ADTYDPLTVG NYLENAWLPV ALGGGLYADN QIKYTGKFAG LTAKAMYSTG TNYESTGAGG FSGQIPGSLG KGNAWGVSLS YVAGPLSIAA GAQQNSDNSA RKQTIYHANV VYAFSKAKVY AGYLRSKDDT GFVDSLLAQQ SIPVAKGTGR IDDGPFAGVS WQVSTPLTLT GAFYYDHMRN AMTTNGTLAS GNRYAIVGIA EYALSKRTEV YGTVDFNKTN GAANVELPGR SNQTGIAIGL RNIF
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