Gene BamMC406_2914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2914 
Symbol 
ID6177763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp3234771 
End bp3235448 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content65% 
IMG OID641682690 
Productcurli production assembly/transport component CsgG 
Protein accessionYP_001809606 
Protein GI172061954 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1462] Uncharacterized protein involved in formation of curli polymers 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.49802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACATTC AGACACGACG CACCGTTCTC GTGGCGGCGG CGCTCGTCGC GGCGCTGTCC 
GGCTGCGCGA CCGAATCGTC GCGCACGCTC GACGTGCCGG CCGTGAGCAG CGCGCAGAAG
CCGTATGCGG GCAAGCCCGT CGCGATCGCG GTCGGCAAGT TCGACAACCG CTCGAGCTAC
ATGCGCGGCA TCTTTTCGGA CGGCATCGAC CGCCTCGGCG GACAGGCGAA GACGATCCTC
GTCACGCGCC TGCAGCAGAG CCGCCGCTTC AACGTGCTCG ATCGCGAGAA CCTCGACGAG
ATCAAGCAGG AAGCAGGCTT CATGAAGAAG GCGCAGGCCG TGAAGGGCGC GAACTACGTC
GTGACCGGCG ACGTGACCGA GTTCGGCCGC AAGGACGTTG GCGATCACCA GCTGTTCGGC
ATTCTCGGCC GCGGCAAGAC GCAGGTCGCA TATGCGAAGG TCAACCTGAA TATCGTCGAT
ACGACGACGT CGGAAGTGGT CGCGTCGAGC CAGGGCGCCG GCGAGTTCAG CCTGTCGAAC
CGCGAAGTGA TCGGCTTCGG CGGCACCGCC GGTTACGATT CCACGCTCAA CGGCAAGGTG
CTGGACCTCG CGATCCAGGA AGCCGTTAAC CACCTCGTCG ACCAGGTCGA CGCCGGTACG
CTGAAGGCGC CGCAGTAA
 
Protein sequence
MNIQTRRTVL VAAALVAALS GCATESSRTL DVPAVSSAQK PYAGKPVAIA VGKFDNRSSY 
MRGIFSDGID RLGGQAKTIL VTRLQQSRRF NVLDRENLDE IKQEAGFMKK AQAVKGANYV
VTGDVTEFGR KDVGDHQLFG ILGRGKTQVA YAKVNLNIVD TTTSEVVASS QGAGEFSLSN
REVIGFGGTA GYDSTLNGKV LDLAIQEAVN HLVDQVDAGT LKAPQ