Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2914 |
Symbol | |
ID | 6177763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 3234771 |
End bp | 3235448 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641682690 |
Product | curli production assembly/transport component CsgG |
Protein accession | YP_001809606 |
Protein GI | 172061954 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1462] Uncharacterized protein involved in formation of curli polymers |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.49802 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACATTC AGACACGACG CACCGTTCTC GTGGCGGCGG CGCTCGTCGC GGCGCTGTCC GGCTGCGCGA CCGAATCGTC GCGCACGCTC GACGTGCCGG CCGTGAGCAG CGCGCAGAAG CCGTATGCGG GCAAGCCCGT CGCGATCGCG GTCGGCAAGT TCGACAACCG CTCGAGCTAC ATGCGCGGCA TCTTTTCGGA CGGCATCGAC CGCCTCGGCG GACAGGCGAA GACGATCCTC GTCACGCGCC TGCAGCAGAG CCGCCGCTTC AACGTGCTCG ATCGCGAGAA CCTCGACGAG ATCAAGCAGG AAGCAGGCTT CATGAAGAAG GCGCAGGCCG TGAAGGGCGC GAACTACGTC GTGACCGGCG ACGTGACCGA GTTCGGCCGC AAGGACGTTG GCGATCACCA GCTGTTCGGC ATTCTCGGCC GCGGCAAGAC GCAGGTCGCA TATGCGAAGG TCAACCTGAA TATCGTCGAT ACGACGACGT CGGAAGTGGT CGCGTCGAGC CAGGGCGCCG GCGAGTTCAG CCTGTCGAAC CGCGAAGTGA TCGGCTTCGG CGGCACCGCC GGTTACGATT CCACGCTCAA CGGCAAGGTG CTGGACCTCG CGATCCAGGA AGCCGTTAAC CACCTCGTCG ACCAGGTCGA CGCCGGTACG CTGAAGGCGC CGCAGTAA
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Protein sequence | MNIQTRRTVL VAAALVAALS GCATESSRTL DVPAVSSAQK PYAGKPVAIA VGKFDNRSSY MRGIFSDGID RLGGQAKTIL VTRLQQSRRF NVLDRENLDE IKQEAGFMKK AQAVKGANYV VTGDVTEFGR KDVGDHQLFG ILGRGKTQVA YAKVNLNIVD TTTSEVVASS QGAGEFSLSN REVIGFGGTA GYDSTLNGKV LDLAIQEAVN HLVDQVDAGT LKAPQ
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