| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2905 |
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| Symbol | |
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| ID | 6178109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 3224678 |
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| End bp | 3225793 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641682681 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001809597 |
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| Protein GI | 172061945 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTCCA GCTTTCTTCG CCAAGCCTGT TCCGTTGCCG CCCTTGCCGC CGCAGCCGCG
TTCACGTCGG TCGCCAGCCC GTCGGCGCAT GCCGATGAGC TGAACATCTA CAACTGGTCC
GACTACATCG CCCCGGACAC GATCCCGAAC TTCCAGAAAC AGACGGGCAT CCACGTCAAG
TACGACAACT ACGACAGCGA CGACACGCTG CAGGCGAAGC TGCTGGCGGG CAGCTCGGGC
TACGACATCG TCGTGCCGAC GTCGAACTAC ATGGCCAAGC AGATCCAGGC CGGCGTGTAC
CAGAAGCTCG ACAAGTCGAA GCTGCCGAAC CTCGCGAACC TCGACCCGCT GCTGATGAAG
ATGATCGCCG ATGCCGACCC GGGCAACCAG TACGGCGTGC CCTGGGCCTA CGGCACGGAC
GGCATCGGCT ACAACGCGCA GGCGGTGAAG AAGGCGCTCG GCGACAAGGC GCCGGTCGAC
AGCTGGGCAC TGGTGTTCGA TCCGGCCAAC ATGGAGAAGC TGAAGAGCTG CGGCGTGTCG
TTCCTCGACC AGGCCGTCGA CGTGTTCGCG GCCACGCTGC AATACATGGG CAAGAACCCG
AACAGCACCA ACCCCGGTGA CTACCAGGCA GCCTTCGAAG TCCTGAAGAA AGTCCGCCCG
TACATCACCC AGTTCAATTC GTCCGGTTAC ATCAACGACC TCGCGAACAA CGACGTGTGC
GTCGCGCTCG GCTGGTCGGG CGACATCGGC ATCGCGCACC GCCGCTCGGC GGAGGCGAAG
CGCGCGTACG ACATCAAGTT CGCGAACCCG AAGGAAGGCG GCCTGCTGTG GTTCGACGTG
ATGGTGATTC CGAAGGATGC CCCGCACCCC GAGGCCGCGA TGAAGTGGAT CAACTACGTG
TCCGACCCGA AGGTCAACGC GGCGATCACC AACACGGTGT TCTACCCGAC CGCGAACAAG
GCCGCGCATC AGTTCGTCAC GCCGGCCGTC GCGCAGGACC CGACCGTCTA TCCGCCGGAA
GACGTGCTGA AGAAGATGGT GCTGATGAAG CCGATGCCGT CCGACATCCT GCGCCTCGAG
AACCGTCTCT GGGCGCAGTT GAAGACGGGC CACTGA
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| Protein sequence | MRSSFLRQAC SVAALAAAAA FTSVASPSAH ADELNIYNWS DYIAPDTIPN FQKQTGIHVK
YDNYDSDDTL QAKLLAGSSG YDIVVPTSNY MAKQIQAGVY QKLDKSKLPN LANLDPLLMK
MIADADPGNQ YGVPWAYGTD GIGYNAQAVK KALGDKAPVD SWALVFDPAN MEKLKSCGVS
FLDQAVDVFA ATLQYMGKNP NSTNPGDYQA AFEVLKKVRP YITQFNSSGY INDLANNDVC
VALGWSGDIG IAHRRSAEAK RAYDIKFANP KEGGLLWFDV MVIPKDAPHP EAAMKWINYV
SDPKVNAAIT NTVFYPTANK AAHQFVTPAV AQDPTVYPPE DVLKKMVLMK PMPSDILRLE
NRLWAQLKTG H
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