Gene BamMC406_2892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2892 
Symbol 
ID6178086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp3212699 
End bp3214516 
Gene Length1818 bp 
Protein Length605 aa 
Translation table11 
GC content68% 
IMG OID641682668 
Productglucosamine--fructose-6-phosphate aminotransferase 
Protein accessionYP_001809584 
Protein GI172061932 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains 
TIGRFAM ID[TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGGCA TTGTCGGCGC AGTTGCGCAG CGTAATATCG TTCCGGTGCT GATCGAAGGA 
TTGCGGCGCC TCGAATACCG TGGCTACGAT TCGTGCGGTG TCGCCGTGCT CGAGCCGGGC
GCACCGAAGC GCGCGCGCAG CGTCGCGCGC GTCGCCGATC TCGACGCGCA GGTCCACGAA
TCGCACCTCG AAGGCACGAC CGGCGTCGCG CACACGCGCT GGGCAACGCA CGGCGCGCCC
GTCACGCACA ATGCGCACCC GATCTTCTCG TCGAACGCGC TCGCGCTGGT GCACAACGGC
ATCATCGAGA ACTTCGAGAC GCTGCGCGAC GCGCTGCGCG CGAAGGGCTA CGAATTCGTG
TCGCAGACCG ACACCGAAGT GATCGCGCAC CTCGTGCACA GCCTGTATCG CGGCAACCTG
TTCGACGCCG TGCGCGAAGC CGTGCAGCAG CTGCACGGCG CGTATGCGAT CGCGGTGACC
CACAAGGACG AGCCGCACAC GGTCGTCGGC GCGCGCCAGG GTTCGCCGCT CGTCGTCGGG
CACGGCGACG GCGAGAACTT CCTCGCGTCC GACGCGCTGG CGCTGGCCGG CAGCACCGAC
CGCTTCACGT TCCTCGAGGA AGGCGACGTG TGCGAACTGT CGCTCGGCGG CGTGAAGATC
GTCGACCGCC ACGGCGCGCT CGCGCAGCGC GAGATCCGCG TCGTCAGCGC GTACGGCGGC
GCGGTCGAGC TCGGCCCGTA TCGCCACTTC ATGCAGAAGG AAATCTTCGA GCAGCCGCGC
GCGATCGGCG ACACGGTGCC GCAAACCGAC GCGTTCGACG CGACGCTGTT CGGCGACGCG
GCCCCCGCCG CGTTCGCTAA CATCGACAGC CTGCTGATCC TCGCGTGCGG CACGAGCTAC
TACTCGGGCC TTACCGCGAA GTACTGGCTC GAATCGATCG CGAAGATCCC GACCCAGGTC
GAGATCGCGA GCGAATACCG CTACCGCGAG TCGGTGCCGA ACCCGCGCCA GCTCGTGCTG
GTGATCTCGC AATCGGGCGA GACGGCCGAC ACGCTCGCCG CGCTCAAGCA CGCGCAGTCG
CTCGGCCACA CGCATACGCT CGCGGTGTGC AACGTCGCGA CGAGCGCGAT GGTGCGCCTC
ACCGAGATGC AGTTCCTGAC GCACGCGGGC ACCGAGATCG GCGTCGCGTC GACGAAGGCG
TTCACGACCC AGCTCGTCGC GCTGTTCGTG CTGGCCGCGA CGCTCGGCAA GCTGCGCGGG
CACGTCGACG CCGCGCAGGA AGCGGAATTC CTGAAGCAGC TGCGCCACCT GCCGGCCGCG
TTGAACAGCG TGCTCGCGCT CGAGCCGCAG ATCATCGCGT GGTCGGAGGA ATTCGCACGC
AAGGAGAACG CACTGTTCCT CGGCCGCGGG CTGCACTATC CGATCGCGCT CGAAGGCGCG
CTGAAGCTGA AGGAAATCTC GTACATCCAC GCGGAGGCCT ATCCGGCCGG CGAACTGAAG
CACGGGCCGC TCGCGCTCGT CACGGAAGCG ATGCCGGTCG TCACGGTCGC GCCGAACGAC
ACGCTGCTCG AGAAGCTGAA GTCGAACATG CAGGAAGTGC GGGCGCGCGG CGGCGAGCTG
TACGTGTTCG CGGATGCCGA CACGCAGATC GTCAACGACG ACGGCCTGCA CGTGATCCGG
ATGCCGGAAC ACTACGGGCA GCTGTCGCCG ATCCTGCACG TCGTGCCGCT GCAACTGCTC
GCGTATCACA CCGCGTGCGC GCGCGGCACC GATGTGGACA AGCCGCGCAA CCTCGCGAAG
TCGGTGACGG TGGAGTAA
 
Protein sequence
MCGIVGAVAQ RNIVPVLIEG LRRLEYRGYD SCGVAVLEPG APKRARSVAR VADLDAQVHE 
SHLEGTTGVA HTRWATHGAP VTHNAHPIFS SNALALVHNG IIENFETLRD ALRAKGYEFV
SQTDTEVIAH LVHSLYRGNL FDAVREAVQQ LHGAYAIAVT HKDEPHTVVG ARQGSPLVVG
HGDGENFLAS DALALAGSTD RFTFLEEGDV CELSLGGVKI VDRHGALAQR EIRVVSAYGG
AVELGPYRHF MQKEIFEQPR AIGDTVPQTD AFDATLFGDA APAAFANIDS LLILACGTSY
YSGLTAKYWL ESIAKIPTQV EIASEYRYRE SVPNPRQLVL VISQSGETAD TLAALKHAQS
LGHTHTLAVC NVATSAMVRL TEMQFLTHAG TEIGVASTKA FTTQLVALFV LAATLGKLRG
HVDAAQEAEF LKQLRHLPAA LNSVLALEPQ IIAWSEEFAR KENALFLGRG LHYPIALEGA
LKLKEISYIH AEAYPAGELK HGPLALVTEA MPVVTVAPND TLLEKLKSNM QEVRARGGEL
YVFADADTQI VNDDGLHVIR MPEHYGQLSP ILHVVPLQLL AYHTACARGT DVDKPRNLAK
SVTVE