Gene BamMC406_2888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2888 
Symbol 
ID6178096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp3208906 
End bp3209649 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content78% 
IMG OID641682664 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001809580 
Protein GI172061928 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTTT CAGCCGATAC GTCGACCCCG CGCATCGCGC TCGTCGCAGG CGCGCTGGAC 
AGCGCGGCCG ACGCCGCGTC GCTCGGTCGT GCGCTCGCGA CCGCCTTCGC GCAGCGCGGC
TGGGACGTCG CGCTGCAACG CAGCGCCGGC GCGCCGCGCG CGGCCGGCGA CGCGCTCGTC
GCCGAAGTCG CCGCCCGCGG CCGCCGCGCG GCGGTGCTCG ACGCCGATCT GGCCCTGGAA
GCCGACGCGG GCGCGCTGGT GGCCGCCTGC GGCGCGGCGC TCGGCCGGCC CACGTGTGCG
GTGTTCGTGA GCGCGTGCGC CGGTACCGAC GACGCGCAGA CGGTGGACGC CGCAGCGCTC
GCCGGCGCGC TGGCCCGCAA CGTGACGGCG CCGCTCGCAC TGGCCCGCGC GCTCGCCGAT
GCGACGCCCG ACGCCGCGCG CGACGATGAA ACGCTGCGCG CGTGCGTGAT CCACGTGCTG
GACCAGGCGC TGTTTCACCC GGCGCCGGCC CGGCTGTCGC ACGCGCTGAT GCAGGCCGCG
CTGAACCGCG CGACCGCCGC GCTGGCGCTG GCCCTCGCGC CGAAGGTGCG CGTCGCGGCG
CTCGTGCGCG GCCACGCGCC GCACGCGGAC GACATCGCGG CGGCGGCCTG CTATCTCGCG
AGCGCGCCCG GCGTCACGGG CGCGACGCTG ACCGTCGACG GCGGCGAGCA CCTGGTGCCG
CCCGCCGCCG GCCCGAATGA ATGA
 
Protein sequence
MTVSADTSTP RIALVAGALD SAADAASLGR ALATAFAQRG WDVALQRSAG APRAAGDALV 
AEVAARGRRA AVLDADLALE ADAGALVAAC GAALGRPTCA VFVSACAGTD DAQTVDAAAL
AGALARNVTA PLALARALAD ATPDAARDDE TLRACVIHVL DQALFHPAPA RLSHALMQAA
LNRATAALAL ALAPKVRVAA LVRGHAPHAD DIAAAACYLA SAPGVTGATL TVDGGEHLVP
PAAGPNE