Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2876 |
Symbol | |
ID | 6177997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 3195780 |
End bp | 3196739 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641682652 |
Product | 2-nitropropane dioxygenase NPD |
Protein accession | YP_001809568 |
Protein GI | 172061916 |
COG category | [R] General function prediction only |
COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTGC CCGCCGTCCT GCAGAACCTG ACGCTGCCCG TCATCGCGTC GCCGATGTTC ATCGTCAGCT ACCCCGAACT CGTGCTCGCG CAATGCAAGG CGGGTATCGT CGGATCCTTC CCCGCGCTCA ACGCCCGTCC GGCCGAACTG CTCGACGAAT GGCTCACGCA GATCCAGTCC GAGCTCGCCG ACCACAAGGC GAAGCACCCG GACGCTGTGA TCGGCCCGAT CGCGGTCAAC CAGATCGTCC ATCAGTCGAA TGTGCGCCTC GAGCATGACG TGCGCGTGTG CGTCGAGCAC AAGGTGCCGA TCTTCATCAC GAGCCTGCGC GCGCCGGCGC GCGAGATCGT CGACGCGGTG CACAGCTACG GCGGCATCGT GCTGCACGAC GTGATCAACC TGCGCCATGC GCAGAAGGCG CTCGAAGCCG GCGTCGACGG GCTGATCCTC GTCGCGGCCG GCGCCGGCGG CCATGCGGGC ACGACGTCGC CGTTCGCGCT CGTCGGCGAA GTGCGCAGGA TGTTCGACGG CCCGATCGTG CTGTCCGGTT CGATCGCGAA CGGCGGCTCG ATCCTCGCCG CGCAGGCGAT GGGCGCCGAC TTCGCGTACA TGGGCACGCG CTTCATCGCG ACGCAGGAAG CGCACGCGGT CGAGGACTAC AAGCACGCGA TCCTCAACGC GAAATCGTCC GACATCATCT ATACGAACCT CTTCACCGGC GTGCACGGCA ACTACATCCG CGAGAGCATC GAGAAGGCCG GCCTCGATCC GGACGCGCTG CCGGAATCGG ACAAGACGAA GATGAATTTC GGCGGCGACA AGACGAAGGC GTGGAAGGAC ATCTGGGGTG CCGGCCAGGG CGTCGGCCTG ATGGACGACC TGCCGAGCGT CGGCGAGCTC GTCGAGCGGA TGAAGCGCGA GTACGACGAC GCGAAGGCCC GGCTCGGCAT CGCACGCTGA
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Protein sequence | MALPAVLQNL TLPVIASPMF IVSYPELVLA QCKAGIVGSF PALNARPAEL LDEWLTQIQS ELADHKAKHP DAVIGPIAVN QIVHQSNVRL EHDVRVCVEH KVPIFITSLR APAREIVDAV HSYGGIVLHD VINLRHAQKA LEAGVDGLIL VAAGAGGHAG TTSPFALVGE VRRMFDGPIV LSGSIANGGS ILAAQAMGAD FAYMGTRFIA TQEAHAVEDY KHAILNAKSS DIIYTNLFTG VHGNYIRESI EKAGLDPDAL PESDKTKMNF GGDKTKAWKD IWGAGQGVGL MDDLPSVGEL VERMKREYDD AKARLGIAR
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